Detailed information
Bioinformatically predicted
Overview
| Name | comF | Type | Machinery gene |
| Locus tag | AhaeAN59_RS01895 | Genome accession | NZ_CP031972 |
| Coordinates | 403822..404247 (+) | Length | 141 a.a. |
| NCBI ID | WP_160126720.1 | Uniprot ID | A0A857IQ04 |
| Organism | Acinetobacter haemolyticus strain AN59 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 398822..409247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AhaeAN59_RS01880 (AhaeAN59_01920) | - | 398984..399670 (+) | 687 | WP_160126463.1 | pilus assembly protein PilX | - |
| AhaeAN59_RS01885 (AhaeAN59_01925) | - | 399688..403158 (+) | 3471 | WP_160126464.1 | pilus assembly protein | - |
| AhaeAN59_RS01890 (AhaeAN59_01930) | - | 403262..403822 (+) | 561 | WP_406741570.1 | pili assembly chaperone | - |
| AhaeAN59_RS01895 (AhaeAN59_01935) | comF | 403822..404247 (+) | 426 | WP_160126720.1 | type IV pilin protein | Machinery gene |
| AhaeAN59_RS01900 (AhaeAN59_01940) | - | 404522..404986 (+) | 465 | WP_160126466.1 | GspH/FimT family pseudopilin | - |
| AhaeAN59_RS01905 (AhaeAN59_01945) | pilV | 404983..405483 (+) | 501 | WP_160126467.1 | type IV pilus modification protein PilV | Machinery gene |
| AhaeAN59_RS01910 (AhaeAN59_01950) | - | 405683..406651 (+) | 969 | WP_267313275.1 | PilW family protein | - |
| AhaeAN59_RS01915 (AhaeAN59_01955) | - | 406648..407372 (+) | 725 | Protein_372 | pilus assembly protein PilX | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15465.63 Da Isoelectric Point: 8.9191
>NTDB_id=312999 AhaeAN59_RS01895 WP_160126720.1 403822..404247(+) (comF) [Acinetobacter haemolyticus strain AN59]
MKENQGFTLIELMIVVAIIAIIAAIAYPSYQEYVKRTKRADMQSEMMQIAQRLQSYYVINHNYTNAKLDNGLDTKDYPSS
GTALYTVTLAPAAQTWILTATPKTGTSQAGNGAVVLNSHGHKCWIKGSSCTLSATSNWDGR
MKENQGFTLIELMIVVAIIAIIAAIAYPSYQEYVKRTKRADMQSEMMQIAQRLQSYYVINHNYTNAKLDNGLDTKDYPSS
GTALYTVTLAPAAQTWILTATPKTGTSQAGNGAVVLNSHGHKCWIKGSSCTLSATSNWDGR
Nucleotide
Download Length: 426 bp
>NTDB_id=312999 AhaeAN59_RS01895 WP_160126720.1 403822..404247(+) (comF) [Acinetobacter haemolyticus strain AN59]
ATGAAAGAAAATCAAGGCTTTACTTTGATTGAGTTGATGATTGTTGTTGCAATTATCGCAATTATAGCTGCCATTGCTTA
TCCATCTTATCAAGAGTATGTGAAGCGAACGAAGAGAGCGGATATGCAAAGTGAAATGATGCAAATCGCTCAGCGTTTGC
AGAGTTATTATGTAATCAATCATAACTATACTAATGCAAAATTGGATAATGGTCTGGATACAAAGGATTATCCGAGTTCA
GGTACAGCACTTTATACGGTTACACTAGCTCCAGCTGCTCAAACATGGATACTCACCGCAACTCCTAAAACAGGAACATC
TCAAGCTGGTAATGGTGCAGTGGTTTTAAATAGCCATGGACATAAATGTTGGATTAAAGGTTCATCTTGCACACTATCTG
CAACTTCTAATTGGGATGGTCGTTAA
ATGAAAGAAAATCAAGGCTTTACTTTGATTGAGTTGATGATTGTTGTTGCAATTATCGCAATTATAGCTGCCATTGCTTA
TCCATCTTATCAAGAGTATGTGAAGCGAACGAAGAGAGCGGATATGCAAAGTGAAATGATGCAAATCGCTCAGCGTTTGC
AGAGTTATTATGTAATCAATCATAACTATACTAATGCAAAATTGGATAATGGTCTGGATACAAAGGATTATCCGAGTTCA
GGTACAGCACTTTATACGGTTACACTAGCTCCAGCTGCTCAAACATGGATACTCACCGCAACTCCTAAAACAGGAACATC
TCAAGCTGGTAATGGTGCAGTGGTTTTAAATAGCCATGGACATAAATGTTGGATTAAAGGTTCATCTTGCACACTATCTG
CAACTTCTAATTGGGATGGTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comF | Acinetobacter baylyi ADP1 |
54.167 |
100 |
0.553 |
| pilE | Acinetobacter baumannii D1279779 |
51.471 |
96.454 |
0.496 |