Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilV   Type   Machinery gene
Locus tag   AhaeAN59_RS01905 Genome accession   NZ_CP031972
Coordinates   404983..405483 (+) Length   166 a.a.
NCBI ID   WP_160126467.1    Uniprot ID   A0A857IGJ3
Organism   Acinetobacter haemolyticus strain AN59     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 399983..410483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN59_RS01890 (AhaeAN59_01930) - 403262..403822 (+) 561 WP_406741570.1 pili assembly chaperone -
  AhaeAN59_RS01895 (AhaeAN59_01935) comF 403822..404247 (+) 426 WP_160126720.1 type IV pilin protein Machinery gene
  AhaeAN59_RS01900 (AhaeAN59_01940) - 404522..404986 (+) 465 WP_160126466.1 GspH/FimT family pseudopilin -
  AhaeAN59_RS01905 (AhaeAN59_01945) pilV 404983..405483 (+) 501 WP_160126467.1 type IV pilus modification protein PilV Machinery gene
  AhaeAN59_RS01910 (AhaeAN59_01950) - 405683..406651 (+) 969 WP_267313275.1 PilW family protein -
  AhaeAN59_RS01915 (AhaeAN59_01955) - 406648..407372 (+) 725 Protein_372 pilus assembly protein PilX -

Sequence


Protein


Download         Length: 166 a.a.        Molecular weight: 17615.06 Da        Isoelectric Point: 4.7649

>NTDB_id=313000 AhaeAN59_RS01905 WP_160126467.1 404983..405483(+) (pilV) [Acinetobacter haemolyticus strain AN59]
MNYNNQKGVGLVEVLVALLLLAIAVLGFAALQLKAVDASAEANQQVLALTIARDLAERMRANPQGLREGEYKIGAVAIPT
EVETTAGSAKEIAEQDLQNASFQANKNGMNLAVTDCPIGEHRQCIYVAWGSTSLSSSKGSGKDDVEACIKDGVYVKGSHC
LFLEAY

Nucleotide


Download         Length: 501 bp        

>NTDB_id=313000 AhaeAN59_RS01905 WP_160126467.1 404983..405483(+) (pilV) [Acinetobacter haemolyticus strain AN59]
ATGAATTATAACAATCAAAAAGGTGTGGGTTTAGTAGAGGTTTTAGTTGCATTGCTACTTCTAGCTATCGCCGTATTGGG
ATTTGCTGCTCTACAGTTAAAAGCAGTAGATGCAAGTGCCGAAGCAAATCAACAAGTATTAGCATTAACCATTGCTCGTG
ATTTGGCAGAGCGTATGCGAGCGAATCCACAAGGATTAAGAGAGGGCGAATATAAAATTGGGGCGGTAGCTATCCCCACA
GAAGTAGAAACTACAGCAGGAAGTGCTAAGGAAATCGCGGAACAAGACCTTCAAAATGCATCTTTTCAAGCAAATAAAAA
TGGTATGAATCTAGCGGTTACTGATTGTCCTATTGGTGAACATCGCCAATGCATTTATGTGGCATGGGGGAGTACGTCTT
TATCTAGTAGCAAGGGTAGTGGTAAGGATGATGTAGAAGCATGCATTAAAGATGGCGTGTATGTAAAAGGATCACACTGT
CTATTTTTGGAGGCTTATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A857IGJ3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Acinetobacter baylyi ADP1

46.629

100

0.5

  pilV Acinetobacter baumannii D1279779

39.205

100

0.416


Multiple sequence alignment