Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   D1B17_RS05265 Genome accession   NZ_CP031933
Coordinates   1171813..1173081 (+) Length   422 a.a.
NCBI ID   WP_120142708.1    Uniprot ID   A0A386PR60
Organism   Companilactobacillus zhachilii strain HBUAS52074     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1166813..1178081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1B17_RS05235 (D1B17_07370) rpsB 1167026..1167829 (+) 804 WP_120142712.1 30S ribosomal protein S2 -
  D1B17_RS05240 (D1B17_07365) tsf 1167902..1168780 (+) 879 WP_120142711.1 translation elongation factor Ts -
  D1B17_RS05245 (D1B17_07360) pyrH 1168950..1169684 (+) 735 WP_120142710.1 UMP kinase -
  D1B17_RS05250 (D1B17_07355) frr 1169674..1170231 (+) 558 WP_120142709.1 ribosome recycling factor -
  D1B17_RS05255 (D1B17_12730) - 1170237..1170980 (+) 744 WP_137432105.1 isoprenyl transferase -
  D1B17_RS05260 (D1B17_12735) - 1170999..1171793 (+) 795 WP_137432106.1 phosphatidate cytidylyltransferase -
  D1B17_RS05265 (D1B17_07345) eeP 1171813..1173081 (+) 1269 WP_120142708.1 RIP metalloprotease RseP Regulator
  D1B17_RS05270 (D1B17_07340) - 1173096..1174802 (+) 1707 WP_120142707.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 45664.03 Da        Isoelectric Point: 9.5213

>NTDB_id=312798 D1B17_RS05265 WP_120142708.1 1171813..1173081(+) (eeP) [Companilactobacillus zhachilii strain HBUAS52074]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSEIQPG
TMSSLVLNDDDKVTKIITSSKVYDANAVPVQISKADLVDDLVIEGYENGDESVTKKYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFILAIVAAIIAAFMMGSVGTGTNQLGGVQSGSVAQKAGLKANDKILSVNGKKTNSWATL
TENIQNNPGKNVTLNVESGHKTEQVKLTPKTVKQSGQKFGMIGITAKLDSSVLGKIKYGFTYSWSTSLTIFHALGKMVSG
GFNINQLSGPVGIYSMTSKVASTGLINIILFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYENVITLIG
VGILVLLMVAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=312798 D1B17_RS05265 WP_120142708.1 1171813..1173081(+) (eeP) [Companilactobacillus zhachilii strain HBUAS52074]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGAATCTTAGTGATCGTTCATGAATTTGGACACTATTATGCTGCAAA
GAAATCTGGAATTTTAGTTCGAGAGTTTTCTGTAGGTATGGGTCCAAAAATTGTGGCATACCGAAAAAATCATACAACTT
ACACTTTGAGACTATTGCCTCTAGGTGGATATGTTCGTATGGCCGGTGCCCAGGAGGATGATTCTGAGATCCAACCGGGA
ACGATGTCATCTTTAGTATTGAATGATGACGACAAAGTAACAAAAATAATAACTTCAAGTAAAGTTTACGATGCAAACGC
GGTTCCAGTTCAAATCTCAAAGGCTGATCTTGTTGATGATTTAGTTATTGAAGGATACGAAAATGGTGACGAATCGGTCA
CTAAAAAGTATTCTGTTGATCATGACGCAACCATTGTTGAAGAGGATGGGACTGAAGTCCAAATTGCACCGCGTGATGTA
CAATTACAATCCGTTTCAGTTTGGAAACGTATGATCACTAATTTTGCTGGACCATTCAACAATTTTATTTTAGCTATCGT
AGCCGCAATTATTGCCGCCTTTATGATGGGTTCAGTTGGAACAGGTACAAATCAACTGGGCGGAGTTCAAAGTGGCTCTG
TGGCTCAAAAAGCGGGCTTAAAAGCTAATGATAAAATTTTAAGCGTCAACGGGAAAAAGACGAATTCTTGGGCAACATTA
ACCGAGAATATTCAAAATAATCCTGGCAAAAATGTGACGCTAAATGTCGAATCGGGCCATAAAACTGAACAAGTTAAATT
GACTCCAAAAACTGTTAAGCAATCAGGCCAAAAGTTTGGCATGATTGGAATTACAGCTAAGTTGGATTCAAGTGTCCTTG
GTAAGATTAAATATGGCTTTACATATAGCTGGAGTACATCACTAACAATTTTTCATGCTTTAGGTAAGATGGTCTCTGGT
GGCTTTAATATTAATCAATTGTCAGGTCCAGTTGGAATTTATTCAATGACTTCCAAGGTGGCCTCAACTGGTTTGATCAA
TATTATTTTGTTCACATCAATGTTATCGATGAACTTGGGGATCGTTAACTTGATACCAATTCCTGCCTTAGATGGTGGAA
AAATTTTGTTAAATATTGTTGAAGCAATTAGAAGGAAACCTATTCCTGAACAATACGAAAATGTCATTACCTTAATTGGT
GTGGGTATTTTAGTCTTGTTGATGGTTGCTGTCACATGGAATGATATCCAGCGCTTCTTTATAAAATAG

Domains


Predicted by InterproScan.

(209-256)

(6-407)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A386PR60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.131

100

0.488

  eeP Streptococcus thermophilus LMD-9

47.897

100

0.486


Multiple sequence alignment