Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | D1E88_RS07385 | Genome accession | NZ_CP031886 |
| Coordinates | 1531716..1532015 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain CFSAN082783 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1526716..1537015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1E88_RS07360 (D1E88_07525) | gcvPA | 1527928..1529274 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| D1E88_RS07365 (D1E88_07530) | gcvT | 1529294..1530385 (-) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| D1E88_RS07370 (D1E88_07535) | - | 1530544..1531068 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| D1E88_RS07375 (D1E88_07540) | - | 1531058..1531204 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| D1E88_RS07380 (D1E88_07545) | comGF | 1531301..1531798 (-) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| D1E88_RS07385 (D1E88_07550) | comGE | 1531716..1532015 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| D1E88_RS07390 (D1E88_07555) | comGD | 1532002..1532448 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| D1E88_RS07395 (D1E88_07560) | comGC | 1532426..1532737 (-) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| D1E88_RS07400 (D1E88_07565) | comGB | 1532751..1533821 (-) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| D1E88_RS07405 (D1E88_07570) | comGA | 1533793..1534767 (-) | 975 | WP_000697223.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| D1E88_RS07410 (D1E88_07575) | - | 1534819..1535442 (-) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| D1E88_RS07415 (D1E88_07580) | - | 1535439..1535768 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| D1E88_RS07420 (D1E88_07585) | - | 1535768..1536754 (-) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| D1E88_RS07425 (D1E88_07590) | - | 1536751..1536954 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=312408 D1E88_RS07385 WP_000844413.1 1531716..1532015(-) (comGE) [Staphylococcus aureus strain CFSAN082783]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=312408 D1E88_RS07385 WP_000844413.1 1531716..1532015(-) (comGE) [Staphylococcus aureus strain CFSAN082783]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |