Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   D1O36_RS10030 Genome accession   NZ_CP031881
Coordinates   1855078..1855845 (+) Length   255 a.a.
NCBI ID   WP_002952299.1    Uniprot ID   A0AAN2DBC4
Organism   Streptococcus thermophilus strain ST106     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1850078..1860845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1O36_RS10015 (D1O36_10050) - 1852395..1853078 (-) 684 WP_011226711.1 YoaK family protein -
  D1O36_RS10020 (D1O36_10055) rlmH 1853094..1853572 (-) 479 Protein_1881 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  D1O36_RS10025 (D1O36_10060) htrA 1853777..1855012 (+) 1236 WP_134973549.1 trypsin-like peptidase domain-containing protein Regulator
  D1O36_RS10030 (D1O36_10065) spo0J 1855078..1855845 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29447.81 Da        Isoelectric Point: 9.6649

>NTDB_id=312362 D1O36_RS10030 WP_002952299.1 1855078..1855845(+) (spo0J) [Streptococcus thermophilus strain ST106]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=312362 D1O36_RS10030 WP_002952299.1 1855078..1855845(+) (spo0J) [Streptococcus thermophilus strain ST106]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCCAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569


Multiple sequence alignment