Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | D1103_RS07805 | Genome accession | NZ_CP031864 |
| Coordinates | 1701049..1701393 (-) | Length | 114 a.a. |
| NCBI ID | WP_005599904.1 | Uniprot ID | A3N254 |
| Organism | Actinobacillus pleuropneumoniae serovar 10 str. D13039 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1696049..1706393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1103_RS07790 (D1103_07855) | - | 1696864..1697484 (+) | 621 | WP_043995137.1 | MerR family transcriptional regulator | - |
| D1103_RS07795 (D1103_07860) | gshAB | 1697576..1699849 (-) | 2274 | WP_005612937.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| D1103_RS07800 (D1103_07865) | asd | 1700005..1700898 (-) | 894 | WP_005612934.1 | archaetidylserine decarboxylase | - |
| D1103_RS07805 (D1103_07870) | comEA/comE1 | 1701049..1701393 (-) | 345 | WP_005599904.1 | ComEA family DNA-binding protein | Machinery gene |
| D1103_RS07810 (D1103_07875) | - | 1701694..1703085 (+) | 1392 | WP_005605242.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| D1103_RS07815 (D1103_07880) | - | 1703207..1703611 (+) | 405 | WP_005599908.1 | MliC family protein | - |
| D1103_RS07820 (D1103_07885) | waaF | 1703693..1704730 (+) | 1038 | WP_009875545.1 | lipopolysaccharide heptosyltransferase II | - |
| D1103_RS07825 (D1103_07890) | rfaC | 1704806..1705765 (+) | 960 | WP_043995139.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| D1103_RS07830 (D1103_07895) | rpsL | 1705887..1706261 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12446.30 Da Isoelectric Point: 10.2030
>NTDB_id=312138 D1103_RS07805 WP_005599904.1 1701049..1701393(-) (comEA/comE1) [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPVVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPVVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
Nucleotide
Download Length: 345 bp
>NTDB_id=312138 D1103_RS07805 WP_005599904.1 1701049..1701393(-) (comEA/comE1) [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCGTAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCGTAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.261 |
100 |
0.588 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
47.115 |
91.228 |
0.43 |