Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | D1109_RS05275 | Genome accession | NZ_CP031858 |
| Coordinates | 1113728..1114072 (-) | Length | 114 a.a. |
| NCBI ID | WP_005599904.1 | Uniprot ID | A3N254 |
| Organism | Actinobacillus pleuropneumoniae strain A-85/14 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1108728..1119072
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1109_RS05260 (D1109_05275) | - | 1109543..1110163 (+) | 621 | WP_005619829.1 | MerR family transcriptional regulator | - |
| D1109_RS05265 (D1109_05280) | gshAB | 1110255..1112528 (-) | 2274 | WP_237611463.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| D1109_RS05270 (D1109_05285) | asd | 1112684..1113577 (-) | 894 | WP_005612934.1 | archaetidylserine decarboxylase | - |
| D1109_RS05275 (D1109_05290) | comEA/comE1 | 1113728..1114072 (-) | 345 | WP_005599904.1 | ComEA family DNA-binding protein | Machinery gene |
| D1109_RS05280 (D1109_05295) | - | 1114373..1115764 (+) | 1392 | WP_237611464.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| D1109_RS05285 (D1109_05300) | - | 1115886..1116290 (+) | 405 | WP_005599908.1 | MliC family protein | - |
| D1109_RS05290 (D1109_05305) | waaF | 1116372..1117409 (+) | 1038 | WP_005619838.1 | lipopolysaccharide heptosyltransferase II | - |
| D1109_RS05295 (D1109_05310) | rfaC | 1117484..1118443 (+) | 960 | WP_005602025.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| D1109_RS05300 (D1109_05315) | rpsL | 1118565..1118939 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12446.30 Da Isoelectric Point: 10.2030
>NTDB_id=311973 D1109_RS05275 WP_005599904.1 1113728..1114072(-) (comEA/comE1) [Actinobacillus pleuropneumoniae strain A-85/14]
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPVVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPVVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
Nucleotide
Download Length: 345 bp
>NTDB_id=311973 D1109_RS05275 WP_005599904.1 1113728..1114072(-) (comEA/comE1) [Actinobacillus pleuropneumoniae strain A-85/14]
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCGTAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCGTAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.261 |
100 |
0.588 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
47.115 |
91.228 |
0.43 |