Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D1G35_RS03625 | Genome accession | NZ_CP031838 |
| Coordinates | 694322..694717 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain QD-CD9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 689322..699717
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1G35_RS03595 (D1G35_03595) | - | 690580..690984 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| D1G35_RS03600 (D1G35_03600) | - | 691322..691414 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| D1G35_RS03605 (D1G35_03605) | - | 691546..691779 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| D1G35_RS03610 (D1G35_03610) | murA | 691890..693155 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| D1G35_RS03615 (D1G35_03615) | fabZ | 693189..693629 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| D1G35_RS03620 (D1G35_03620) | - | 693688..694128 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| D1G35_RS03625 (D1G35_03625) | ssb | 694322..694717 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| D1G35_RS03630 (D1G35_03630) | sceD | 695105..695800 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| D1G35_RS03640 (D1G35_03640) | tenA | 696324..697013 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| D1G35_RS03645 (D1G35_03645) | thiD | 697006..697836 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| D1G35_RS03650 (D1G35_03650) | thiM | 697820..698620 (+) | 801 | WP_031590212.1 | hydroxyethylthiazole kinase | - |
| D1G35_RS03655 (D1G35_03655) | thiE | 698613..699254 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=311677 D1G35_RS03625 WP_000932694.1 694322..694717(+) (ssb) [Staphylococcus aureus strain QD-CD9]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=311677 D1G35_RS03625 WP_000932694.1 694322..694717(+) (ssb) [Staphylococcus aureus strain QD-CD9]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |