Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   D0819_RS14765 Genome accession   NZ_CP031784
Coordinates   2841678..2841797 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain HMNig-2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2836678..2846797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0819_RS14740 (D0819_14785) albG 2836842..2837543 (+) 702 WP_077670954.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  D0819_RS14745 (D0819_14790) ywhL 2837549..2838925 (-) 1377 WP_077670953.1 YncE family protein -
  D0819_RS14750 (D0819_14795) ywhK 2838964..2840319 (-) 1356 WP_015250986.1 YncE family protein -
  D0819_RS21880 (D0819_14800) - 2840316..2840546 (-) 231 Protein_2921 hypothetical protein -
  D0819_RS14760 (D0819_14805) rapF 2840549..2841694 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  D0819_RS14765 (D0819_14810) phrF 2841678..2841797 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  D0819_RS14770 (D0819_14815) - 2842024..2842500 (+) 477 WP_015384936.1 hypothetical protein -
  D0819_RS14775 (D0819_14820) - 2842760..2843446 (+) 687 WP_241495663.1 hypothetical protein -
  D0819_RS14780 (D0819_14835) - 2844922..2845569 (+) 648 WP_029318689.1 ABC transporter ATP-binding protein -
  D0819_RS14785 (D0819_14840) - 2845562..2846125 (+) 564 WP_153257092.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=311406 D0819_RS14765 WP_009968329.1 2841678..2841797(+) (phrF) [Bacillus subtilis strain HMNig-2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=311406 D0819_RS14765 WP_009968329.1 2841678..2841797(+) (phrF) [Bacillus subtilis strain HMNig-2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment