Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | D0808_RS14800 | Genome accession | NZ_CP031783 |
| Coordinates | 2903492..2904529 (-) | Length | 345 a.a. |
| NCBI ID | WP_153256199.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MENO2 voucher National Research Centre | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2898492..2909529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0808_RS14750 (D0808_14865) | tasA | 2898588..2899373 (-) | 786 | WP_153256196.1 | biofilm matrix protein TasA | - |
| D0808_RS14755 (D0808_14870) | sipW | 2899437..2900009 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| D0808_RS14760 (D0808_14875) | tapA | 2899993..2900754 (-) | 762 | WP_129092525.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D0808_RS14765 (D0808_14880) | yqzG | 2901027..2901353 (+) | 327 | WP_024573388.1 | YqzG/YhdC family protein | - |
| D0808_RS14770 (D0808_14885) | spoIITA | 2901395..2901574 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| D0808_RS14775 (D0808_14890) | comGG | 2901646..2902020 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| D0808_RS14780 (D0808_14895) | comGF | 2902021..2902404 (-) | 384 | WP_130572559.1 | ComG operon protein ComGF | Machinery gene |
| D0808_RS14785 (D0808_14900) | comGE | 2902430..2902777 (-) | 348 | WP_153256197.1 | ComG operon protein 5 | Machinery gene |
| D0808_RS14790 (D0808_14905) | comGD | 2902761..2903192 (-) | 432 | WP_153256198.1 | comG operon protein ComGD | Machinery gene |
| D0808_RS14795 (D0808_14910) | comGC | 2903182..2903478 (-) | 297 | WP_129092527.1 | comG operon protein ComGC | Machinery gene |
| D0808_RS14800 (D0808_14915) | comGB | 2903492..2904529 (-) | 1038 | WP_153256199.1 | comG operon protein ComGB | Machinery gene |
| D0808_RS14805 (D0808_14920) | comGA | 2904516..2905586 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| D0808_RS14815 (D0808_14930) | corA | 2905982..2906935 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| D0808_RS14820 (D0808_14935) | yqhB | 2907078..2908406 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| D0808_RS14825 (D0808_14940) | rsbRD | 2908459..2909295 (-) | 837 | WP_153256200.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39773.24 Da Isoelectric Point: 9.7151
>NTDB_id=311318 D0808_RS14800 WP_153256199.1 2903492..2904529(-) (comGB) [Bacillus subtilis strain MENO2 voucher National Research Centre]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFVFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGRPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFVFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGRPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=311318 D0808_RS14800 WP_153256199.1 2903492..2904529(-) (comGB) [Bacillus subtilis strain MENO2 voucher National Research Centre]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGTTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAACTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGACCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATTCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGTTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAACTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGACCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATTCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.833 |
93.623 |
0.916 |