Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D0808_RS04870 Genome accession   NZ_CP031783
Coordinates   959658..960608 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain MENO2 voucher National Research Centre     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 954658..965608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0808_RS04845 (D0808_04895) rapC 956119..957267 (+) 1149 WP_024571686.1 response regulator aspartate phosphatase RapC Regulator
  D0808_RS04850 (D0808_04900) phrC 957251..957373 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D0808_RS04855 (D0808_04905) yczM 957472..957561 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  D0808_RS04860 (D0808_04910) yczN 957643..957756 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  D0808_RS04865 (D0808_04915) thrD 957909..959273 (-) 1365 WP_153255669.1 aspartate kinase -
  D0808_RS04870 (D0808_04920) ceuB 959658..960608 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  D0808_RS04875 (D0808_04925) yclO 960601..961548 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  D0808_RS04880 (D0808_04930) yclP 961542..962300 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  D0808_RS04885 (D0808_04935) yclQ 962322..963275 (+) 954 WP_153255670.1 petrobactin ABC transporter substrate-binding protein YclQ -
  D0808_RS04890 (D0808_04940) cdaE 963322..964740 (-) 1419 WP_120027775.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=311283 D0808_RS04870 WP_014475804.1 959658..960608(+) (ceuB) [Bacillus subtilis strain MENO2 voucher National Research Centre]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=311283 D0808_RS04870 WP_014475804.1 959658..960608(+) (ceuB) [Bacillus subtilis strain MENO2 voucher National Research Centre]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment