Detailed information
Bioinformatically predicted
Overview
| Name | pilG | Type | Regulator |
| Locus tag | CJA_RS00390 | Genome accession | NC_010995 |
| Coordinates | 126864..127259 (-) | Length | 131 a.a. |
| NCBI ID | WP_007639219.1 | Uniprot ID | - |
| Organism | Cellvibrio japonicus Ueda107 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 88946..132093 | 126864..127259 | within | 0 |
Gene organization within MGE regions
Location: 88946..132093
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJA_RS00235 (CJA_0047) | - | 88946..89320 (+) | 375 | WP_012485731.1 | Na+/H+ antiporter subunit C | - |
| CJA_RS00240 (CJA_0048) | - | 89317..90825 (+) | 1509 | WP_012485732.1 | monovalent cation/H+ antiporter subunit D | - |
| CJA_RS00245 (CJA_0049) | - | 90859..91404 (+) | 546 | WP_012485733.1 | Na+/H+ antiporter subunit E | - |
| CJA_RS00250 (CJA_0050) | - | 91386..91655 (+) | 270 | WP_012485734.1 | K+/H+ antiporter subunit F | - |
| CJA_RS00255 (CJA_0051) | - | 91665..91994 (+) | 330 | WP_012485735.1 | Na+/H+ antiporter subunit G | - |
| CJA_RS00260 (CJA_0052) | - | 92074..94611 (-) | 2538 | WP_012485736.1 | heavy metal translocating P-type ATPase | - |
| CJA_RS00265 (CJA_0053) | - | 95000..97042 (+) | 2043 | WP_012485737.1 | pectate lyase | - |
| CJA_RS00270 (CJA_0054) | - | 97165..97890 (-) | 726 | WP_012485738.1 | lysophospholipid acyltransferase family protein | - |
| CJA_RS00275 (CJA_0055) | gmhB | 97906..98478 (-) | 573 | WP_041550781.1 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase | - |
| CJA_RS00280 (CJA_0056) | glyS | 98641..100719 (-) | 2079 | WP_012485740.1 | glycine--tRNA ligase subunit beta | - |
| CJA_RS00285 (CJA_0057) | glyQ | 100719..101690 (-) | 972 | WP_012485741.1 | glycine--tRNA ligase subunit alpha | - |
| CJA_RS00290 (CJA_0058) | - | 101967..102533 (+) | 567 | WP_012485742.1 | CBS domain-containing protein | - |
| CJA_RS00295 (CJA_0059) | - | 102734..103408 (-) | 675 | WP_012485743.1 | hypothetical protein | - |
| CJA_RS00300 (CJA_0060) | - | 103550..104446 (+) | 897 | WP_041550783.1 | lysophospholipid acyltransferase family protein | - |
| CJA_RS00305 (CJA_0061) | - | 104630..105430 (+) | 801 | WP_012485745.1 | ATP-dependent zinc protease | - |
| CJA_RS00310 (CJA_0062) | - | 105463..107013 (+) | 1551 | WP_012485746.1 | inactive transglutaminase family protein | - |
| CJA_RS00315 (CJA_0063) | - | 107010..108023 (+) | 1014 | WP_012485747.1 | alpha-L-glutamate ligase-like protein | - |
| CJA_RS00320 (CJA_0064) | - | 108133..108696 (+) | 564 | WP_012485748.1 | porin family protein | - |
| CJA_RS00325 (CJA_0066) | - | 109061..110407 (+) | 1347 | WP_083766803.1 | glycosyltransferase family 4 protein | - |
| CJA_RS00330 (CJA_0067) | - | 110394..111143 (+) | 750 | WP_012485751.1 | class I SAM-dependent methyltransferase | - |
| CJA_RS00335 (CJA_0068) | - | 111140..112210 (+) | 1071 | WP_012485752.1 | hypothetical protein | - |
| CJA_RS00340 (CJA_0070) | - | 112213..112938 (+) | 726 | WP_012485753.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| CJA_RS00345 (CJA_0069) | - | 112935..113285 (-) | 351 | WP_012485754.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| CJA_RS00350 (CJA_0071) | - | 113367..113981 (-) | 615 | WP_012485755.1 | hypothetical protein | - |
| CJA_RS00355 (CJA_0072) | - | 114019..114498 (-) | 480 | WP_012485756.1 | chemotaxis protein CheW | - |
| CJA_RS00360 (CJA_0073) | - | 114520..115434 (-) | 915 | WP_238526799.1 | chemotaxis protein CheB | - |
| CJA_RS00365 (CJA_0074) | - | 115439..122440 (-) | 7002 | WP_041550786.1 | Hpt domain-containing protein | - |
| CJA_RS00370 (CJA_0075) | - | 122459..123316 (-) | 858 | WP_041550789.1 | CheR family methyltransferase | - |
| CJA_RS00375 (CJA_0076) | - | 123436..125601 (-) | 2166 | WP_012485760.1 | methyl-accepting chemotaxis protein | - |
| CJA_RS00380 (CJA_0077) | - | 125707..126249 (-) | 543 | WP_041550790.1 | chemotaxis protein CheW | - |
| CJA_RS00385 (CJA_0078) | pilH | 126372..126734 (-) | 363 | WP_012485762.1 | twitching motility response regulator PilH | - |
| CJA_RS00390 (CJA_0080) | pilG | 126864..127259 (-) | 396 | WP_007639219.1 | twitching motility response regulator PilG | Regulator |
| CJA_RS00395 (CJA_0081) | gshB | 127605..128558 (+) | 954 | WP_012485764.1 | glutathione synthase | - |
| CJA_RS00400 (CJA_0082) | - | 128581..129480 (+) | 900 | WP_012485765.1 | energy transducer TonB | - |
| CJA_RS00405 (CJA_0083) | - | 129546..130142 (+) | 597 | WP_049765371.1 | YqgE/AlgH family protein | - |
| CJA_RS00410 (CJA_0084) | ruvX | 130146..130577 (+) | 432 | WP_012485767.1 | Holliday junction resolvase RuvX | - |
| CJA_RS00415 (CJA_0085) | - | 130589..130915 (-) | 327 | WP_012485768.1 | YegP family protein | - |
| CJA_RS00420 (CJA_0086) | pilU | 130948..132093 (-) | 1146 | WP_012485769.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14472.94 Da Isoelectric Point: 8.4809
>NTDB_id=31110 CJA_RS00390 WP_007639219.1 126864..127259(-) (pilG) [Cellvibrio japonicus Ueda107]
MEVTYESLKVMVIDDSKTIRRTAETLLKKAGCMVITATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
TTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIEAHVKHLKAS
MEVTYESLKVMVIDDSKTIRRTAETLLKKAGCMVITATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
TTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIEAHVKHLKAS
Nucleotide
Download Length: 396 bp
>NTDB_id=31110 CJA_RS00390 WP_007639219.1 126864..127259(-) (pilG) [Cellvibrio japonicus Ueda107]
ATGGAAGTAACTTACGAAAGCCTGAAGGTAATGGTTATCGACGACAGCAAAACCATTCGCCGCACGGCTGAAACCCTGTT
AAAAAAAGCGGGCTGCATGGTGATTACCGCCACCGATGGCTTTGATGCCCTGGCAAAAATCGCTGATACCCGCCCCGACA
TCATTTTCGTCGATATCATGATGCCGCGCCTCGATGGCTATCAAACCTGTGCATTAATCAAAAACAATAGCGAATTCAAA
ACCACCCCTGTCATTATGCTCTCCAGCAAAGACGGGCTATTCGATAAGGCCAAGGGGCGCATTGTTGGCTCCGACCAATA
CCTGACCAAACCCTTTAGTAAAAGTGAGCTGCTGGGCGCTATTGAGGCCCACGTCAAGCATTTGAAAGCCTCCTGA
ATGGAAGTAACTTACGAAAGCCTGAAGGTAATGGTTATCGACGACAGCAAAACCATTCGCCGCACGGCTGAAACCCTGTT
AAAAAAAGCGGGCTGCATGGTGATTACCGCCACCGATGGCTTTGATGCCCTGGCAAAAATCGCTGATACCCGCCCCGACA
TCATTTTCGTCGATATCATGATGCCGCGCCTCGATGGCTATCAAACCTGTGCATTAATCAAAAACAATAGCGAATTCAAA
ACCACCCCTGTCATTATGCTCTCCAGCAAAGACGGGCTATTCGATAAGGCCAAGGGGCGCATTGTTGGCTCCGACCAATA
CCTGACCAAACCCTTTAGTAAAAGTGAGCTGCTGGGCGCTATTGAGGCCCACGTCAAGCATTTGAAAGCCTCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilG | Acinetobacter baumannii strain A118 |
76 |
95.42 |
0.725 |
| vicR | Streptococcus mutans UA159 |
43.22 |
90.076 |
0.389 |