Detailed information NTG0310858

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: DDV21_RS09825
• Genome accession: NZ_CP031733
• Coordinates: 2052864..2053916 (-)
• Length: 350 a.a.
• NCBI ID: WP_116878457.1
• Uniprot ID: A0A372KKS6
• Organism: Streptococcus chenjunshii strain Z15
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2047864..2058916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDV21_RS09805 (DDV21_009805)	-	2048340..2049338 (-)	999	WP_116878461.1	NADP-dependent oxidoreductase	-
DDV21_RS09810 (DDV21_009810)	-	2049422..2049853 (-)	432	WP_116878460.1	Rrf2 family transcriptional regulator	-
DDV21_RS09815 (DDV21_009815)	-	2050155..2051384 (+)	1230	WP_116878459.1	IS110 family transposase	-
DDV21_RS09820 (DDV21_009820)	amiF	2051936..2052871 (-)	936	WP_116878458.1	ATP-binding cassette domain-containing protein	Regulator
DDV21_RS09825 (DDV21_009825)	oppD	2052864..2053916 (-)	1053	WP_116878457.1	ABC transporter ATP-binding protein	Regulator
DDV21_RS09830 (DDV21_009830)	-	2053929..2054960 (-)	1032	WP_116878456.1	ABC transporter permease	-
DDV21_RS09835 (DDV21_009835)	-	2054971..2055885 (-)	915	WP_116878455.1	ABC transporter permease	-
DDV21_RS09840 (DDV21_009840)	-	2055996..2057645 (-)	1650	WP_116878454.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 39010.64 Da
• Isoelectric Point: 5.4296

>NTDB_id=310858 DDV21_RS09825 WP_116878457.1 2052864..2053916(-) (oppD) [Streptococcus chenjunshii strain Z15]
MSKETILQVKNLHVDFHTYAGEVKAIRDVNFELKQGETLAIVGESGSGKSVTTRTLIGLSAANAKMTGDIDFKGTKLHEL
KEEDWVKIRGNEIAMIFQDPMTSLDPTMKIGKQIAEPMLLHEKISKQEAMDRALELMKNVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILNLMKQIQKERNSSIIFITHDLGVVAGMADRVAVMYAGKIIEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEAGSLQSIPGTPPDLLNPPQGDAFAPRNAFALDIDHEQEPPMFRVSDSHYAATWLL
DERAPQIKVPATIEKRWQKWKKLKGEKFSD

Nucleotide

• Length: 1053 bp

>NTDB_id=310858 DDV21_RS09825 WP_116878457.1 2052864..2053916(-) (oppD) [Streptococcus chenjunshii strain Z15]
ATGAGTAAAGAAACAATTTTACAAGTCAAAAACCTCCATGTAGATTTTCATACTTATGCAGGGGAAGTTAAAGCCATCCG
CGATGTTAATTTTGAGCTTAAACAGGGGGAAACGCTTGCCATAGTCGGTGAATCAGGAAGCGGGAAGTCGGTCACAACCC
GCACCCTTATCGGTTTATCTGCAGCTAATGCTAAAATGACCGGCGATATTGACTTTAAAGGAACTAAGCTGCATGAGCTG
AAAGAGGAAGACTGGGTGAAAATCCGTGGAAATGAAATCGCGATGATTTTTCAAGATCCGATGACCAGCCTTGACCCGAC
AATGAAAATCGGAAAGCAGATTGCTGAGCCGATGCTGCTTCATGAAAAAATTTCCAAGCAGGAAGCCATGGACAGAGCGC
TTGAATTGATGAAAAATGTTGGTATTCCCAACGCTGAAGAGCATATCAATGATTACCCTCATCAATGGTCAGGAGGGATG
CGTCAGCGGGCTGTTATCGCTATCGCATTGGCAGCTAATCCTGATATTCTTATTGCCGATGAACCGACCACAGCACTAGA
TGTGACCATCCAAGCTCAAATTCTTAATCTGATGAAGCAGATTCAAAAAGAGCGTAACTCTTCAATTATTTTTATCACAC
ATGACCTTGGAGTGGTTGCCGGAATGGCTGACCGTGTGGCTGTCATGTATGCAGGTAAAATTATTGAATATGGAACTGTT
GATGAAGTGTTTTACAACCCGCAGCATCCTTATACTTGGGGATTGCTCAATTCAATGCCGACAACCGATACGGAAGCCGG
CAGCCTTCAGTCTATTCCGGGGACACCGCCGGATCTGCTGAATCCCCCTCAAGGAGATGCCTTTGCTCCGCGGAATGCGT
TCGCCTTAGATATTGATCATGAACAAGAACCGCCAATGTTCAGAGTTTCTGACTCACATTATGCGGCAACTTGGCTGCTG
GATGAACGAGCTCCCCAAATAAAGGTACCTGCTACCATTGAAAAACGTTGGCAAAAGTGGAAAAAACTGAAAGGGGAGAA
GTTCAGTGACTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: A0A372KKS6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	80.571	100	0.806
amiE	Streptococcus salivarius strain HSISS4	54.913	98.857	0.543
amiE	Streptococcus thermophilus LMG 18311	55	97.143	0.534
amiE	Streptococcus thermophilus LMD-9	55	97.143	0.534