Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC/comC1   Type   Regulator
Locus tag   DDV21_RS08650 Genome accession   NZ_CP031733
Coordinates   1808927..1809067 (-) Length   46 a.a.
NCBI ID   WP_116877997.1    Uniprot ID   A0A372KM63
Organism   Streptococcus chenjunshii strain Z15     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1803927..1814067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV21_RS08620 (DDV21_008620) - 1804071..1804379 (+) 309 WP_116877991.1 bacteriocin immunity protein -
  DDV21_RS08630 (DDV21_008630) - 1805127..1805411 (+) 285 WP_116877993.1 hypothetical protein -
  DDV21_RS08635 (DDV21_008635) - 1805512..1806483 (+) 972 WP_116877994.1 thioredoxin family protein -
  DDV21_RS08640 (DDV21_008640) comE/comE1 1806862..1807593 (+) 732 WP_116877995.1 response regulator transcription factor Regulator
  DDV21_RS08645 (DDV21_008645) - 1807601..1808908 (+) 1308 WP_116877996.1 GHKL domain-containing protein -
  DDV21_RS08650 (DDV21_008650) comC/comC1 1808927..1809067 (-) 141 WP_116877997.1 lactococcin family bacteriocin Regulator
  DDV21_RS08655 (DDV21_008655) - 1809327..1811687 (-) 2361 WP_116877998.1 DNA translocase FtsK -
  DDV21_RS08665 (DDV21_008665) - 1812028..1812726 (-) 699 WP_116878000.1 3-oxoacyl-ACP reductase -
  DDV21_RS08670 (DDV21_008670) - 1812948..1813859 (-) 912 WP_116878001.1 magnesium transporter CorA family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5314.06 Da        Isoelectric Point: 10.2564

>NTDB_id=310850 DDV21_RS08650 WP_116877997.1 1808927..1809067(-) (comC/comC1) [Streptococcus chenjunshii strain Z15]
MKQDKKFKELSQSELEETVGGNSKNVLLTGPFDWLKNFQNKAKKQT

Nucleotide


Download         Length: 141 bp        

>NTDB_id=310850 DDV21_RS08650 WP_116877997.1 1808927..1809067(-) (comC/comC1) [Streptococcus chenjunshii strain Z15]
ATGAAACAGGATAAAAAATTTAAAGAACTGAGCCAATCTGAGTTAGAGGAGACGGTCGGAGGAAACAGCAAAAACGTTTT
GCTGACCGGTCCCTTTGATTGGTTGAAAAATTTTCAAAATAAAGCTAAAAAACAAACTTAG

Domains

Predicted by InterproScan.

Lactococcin-like family (Lactococcin)

(1-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A372KM63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC/comC1 Streptococcus equinus JB1

55.556

97.826

0.543

Multiple sequence alignment