Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   DDV21_RS06905 Genome accession   NZ_CP031733
Coordinates   1425281..1427083 (-) Length   600 a.a.
NCBI ID   WP_116877665.1    Uniprot ID   A0A372KN31
Organism   Streptococcus chenjunshii strain Z15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1420281..1432083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV21_RS06880 (DDV21_006880) - 1420426..1421199 (-) 774 WP_116877661.1 ABC transporter ATP-binding protein -
  DDV21_RS06885 (DDV21_006885) - 1421210..1422115 (-) 906 WP_116877662.1 glycine betaine ABC transporter substrate-binding protein -
  DDV21_RS06890 (DDV21_006890) - 1422105..1422740 (-) 636 WP_116877663.1 ABC transporter permease -
  DDV21_RS06895 (DDV21_006895) - 1422733..1423191 (-) 459 WP_241964655.1 MarR family transcriptional regulator -
  DDV21_RS06900 (DDV21_006900) rcrQ 1423540..1425291 (-) 1752 WP_116877664.1 ABC transporter ATP-binding protein Regulator
  DDV21_RS06905 (DDV21_006905) rcrP 1425281..1427083 (-) 1803 WP_116877665.1 ABC transporter ATP-binding protein Regulator
  DDV21_RS06910 (DDV21_006910) - 1427612..1428043 (-) 432 Protein_1308 MarR family transcriptional regulator -
  DDV21_RS06915 (DDV21_006915) gdhA 1428493..1429842 (-) 1350 WP_116877667.1 NADP-specific glutamate dehydrogenase -
  DDV21_RS06920 (DDV21_006920) - 1430295..1430801 (+) 507 WP_116877668.1 DUF308 domain-containing protein -
  DDV21_RS06925 (DDV21_006925) - 1430990..1431910 (-) 921 WP_116877669.1 AEC family transporter -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66334.72 Da        Isoelectric Point: 5.8467

>NTDB_id=310841 DDV21_RS06905 WP_116877665.1 1425281..1427083(-) (rcrP) [Streptococcus chenjunshii strain Z15]
MLKIFKRLNAKEWGMIFLSTVFICLAVWMDLKTPSYMSEITTLLQTEGTTAADIMGPGSKMLILSFSSFMSAVVVGFLAA
RTAASFTTRLRADIFNQVMDYSDAEIKKFSIPSLLTRTTNDLTQLQILITMGMQVVTRGPIMAVWALTKIWGKSSEWSWS
VGGAVFIVLILLSVMLFVAFPRMSKIQSLTDALNSTTREILSGIRVVRAYNAEDYQDAKFTKENDKLTKLNLFVHRLMAL
MNPVMTLVSSGLTLAIYWIGAHLIDRISVSAADMSQAAADVKDRVAVFSDMVVFSSYAMQVVMGFMMMVAIFIILPRALV
SAGRINEVLALDSTVSFKEKGDKTGNQTGTVVFRDVSFRYAEDSEAVIEHVSFRAESGQTVAFIGSTGSGKSTLVNLLPR
FYDVTEGSILVDGVDIRDYSHEDLNSKIGYIPQKAVLFSGTIRSNIEFGVSSQTPLDDDKIWEALDLAQAKDFVANKEQG
LDAEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRENLAKQTDRMTKLIVAQRISTIMDADQIL
VLDEGKVVGQGTHKELLADNKVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=310841 DDV21_RS06905 WP_116877665.1 1425281..1427083(-) (rcrP) [Streptococcus chenjunshii strain Z15]
ATGTTAAAAATTTTTAAGCGCTTGAATGCTAAGGAATGGGGGATGATCTTCCTTAGCACAGTATTCATTTGTCTGGCTGT
TTGGATGGATTTAAAAACGCCGTCTTATATGTCGGAAATTACCACTTTGCTGCAGACTGAAGGAACGACTGCTGCTGATA
TCATGGGGCCAGGCTCCAAGATGCTTATCTTGTCGTTTTCCAGTTTTATGAGTGCAGTAGTTGTTGGCTTTTTGGCAGCA
CGGACAGCAGCCAGTTTCACTACCCGTTTGCGGGCTGACATTTTTAATCAGGTGATGGATTATTCGGATGCTGAAATTAA
GAAATTTTCTATCCCCAGCCTGCTGACACGGACAACCAATGATTTAACTCAGCTGCAGATTCTTATCACAATGGGAATGC
AGGTTGTAACCCGCGGTCCGATTATGGCTGTCTGGGCTTTGACGAAAATTTGGGGCAAAAGTTCAGAGTGGAGCTGGTCT
GTCGGCGGAGCGGTGTTTATTGTGCTGATTTTACTGTCAGTTATGCTGTTTGTAGCTTTTCCGCGCATGAGTAAGATTCA
GTCTCTAACTGATGCTTTAAACAGCACGACCAGAGAAATTCTTTCGGGAATCCGGGTGGTACGTGCCTATAATGCTGAAG
ACTATCAGGATGCAAAATTTACCAAAGAAAATGATAAATTGACCAAGCTCAATCTCTTTGTCCATCGGCTTATGGCACTT
ATGAATCCTGTGATGACACTGGTTTCAAGCGGTTTGACTTTGGCCATTTATTGGATTGGTGCACATTTAATTGATCGTAT
CAGCGTGTCGGCAGCCGATATGAGCCAGGCTGCGGCTGATGTTAAAGATCGTGTGGCTGTTTTCAGTGATATGGTGGTCT
TTTCATCCTATGCTATGCAAGTTGTCATGGGCTTTATGATGATGGTGGCTATCTTCATTATTTTGCCGCGGGCACTTGTT
TCTGCCGGCCGTATTAATGAAGTATTGGCACTGGATTCAACTGTTTCCTTTAAAGAAAAAGGAGATAAAACGGGCAATCA
GACCGGCACCGTTGTCTTTAGAGATGTTTCTTTCCGCTATGCTGAAGATTCTGAGGCCGTCATCGAACATGTCAGTTTTA
GGGCTGAATCAGGTCAGACGGTAGCTTTCATTGGCTCGACAGGATCTGGGAAATCAACTCTCGTTAACTTGCTCCCGCGT
TTTTATGATGTGACAGAAGGCAGTATTTTAGTTGATGGTGTGGATATTCGTGATTACAGTCATGAGGATTTAAACAGTAA
AATTGGTTATATCCCGCAAAAAGCAGTTCTTTTCAGCGGAACAATTCGTTCCAATATAGAATTTGGGGTAAGCAGTCAAA
CGCCGCTTGATGATGATAAGATTTGGGAGGCTTTGGACTTGGCGCAAGCCAAAGATTTTGTCGCTAATAAAGAGCAGGGA
CTGGATGCAGAAGTTGCTCAGGGGGGTACCAATTTTTCGGGCGGTCAAAAACAGCGATTGGCTATCGCCCGTGCTTTAGC
GCGCAAACCAGAAATTTTGATTTTTGATGACTCTTTCTCAGCCTTAGATTATAAAACAGACCGTATTCTGCGTGAAAACC
TAGCTAAGCAGACCGATCGGATGACTAAGCTGATCGTTGCTCAGCGTATTTCAACAATTATGGATGCTGATCAAATTTTG
GTTTTAGATGAAGGCAAAGTGGTCGGTCAGGGAACCCACAAAGAACTGCTGGCTGATAATAAAGTCTATCAGGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGGAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-271)

ABC transporter (ABC_tran)

(369-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A372KN31

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

79

100

0.79

Multiple sequence alignment