Detailed information NTG0310839

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: DDV21_RS06765
• Genome accession: NZ_CP031733
• Coordinates: 1393802..1395031 (-)
• Length: 409 a.a.
• NCBI ID: WP_116877639.1
• Uniprot ID: -
• Organism: Streptococcus chenjunshii strain Z15
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1388802..1400031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDV21_RS06745 (DDV21_006745)	-	1389365..1390015 (+)	651	WP_116877635.1	deoxyribonuclease I	-
DDV21_RS06750 (DDV21_006750)	mmuM	1390022..1390972 (-)	951	WP_116877636.1	homocysteine S-methyltransferase	-
DDV21_RS06755 (DDV21_006755)	-	1391493..1392869 (-)	1377	WP_116877637.1	amino acid permease	-
DDV21_RS06760 (DDV21_006760)	yihA	1393191..1393790 (-)	600	WP_116877638.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
DDV21_RS06765 (DDV21_006765)	clpX	1393802..1395031 (-)	1230	WP_116877639.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
DDV21_RS06775 (DDV21_006775)	-	1395263..1395760 (-)	498	WP_116877641.1	dihydrofolate reductase	-
DDV21_RS06780 (DDV21_006780)	-	1395847..1396686 (-)	840	WP_116877642.1	thymidylate synthase	-
DDV21_RS06785 (DDV21_006785)	-	1396995..1398182 (+)	1188	WP_116877643.1	hydroxymethylglutaryl-CoA synthase	-
DDV21_RS06790 (DDV21_006790)	-	1398172..1399473 (+)	1302	WP_116877644.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 44816.14 Da
• Isoelectric Point: 4.4197

>NTDB_id=310839 DDV21_RS06765 WP_116877639.1 1393802..1395031(-) (clpX) [Streptococcus chenjunshii strain Z15]
MAGNRNNDVKVYCSFCGKSQDEVKKIIAGNSVFICNECVALSQEIIREELAEEVLADLSEVPKPKELLAILNEYVVGQDH
AKRALAVAVYNHYKRVSFTESQDDGDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKVIGFGQNNKQLSDGISYMQEIISEDIQKFGLIPEFIGRLPVVAALEELTADDLVRI
LTEPRNALVKQYQTLMSYDGVELDFDEAALKAIANKAIERKTGARGLRSIIEETMLDIMFEIPSQEEVSKVRITKEAVDG
TDGPVLETA

Nucleotide

• Length: 1230 bp

>NTDB_id=310839 DDV21_RS06765 WP_116877639.1 1393802..1395031(-) (clpX) [Streptococcus chenjunshii strain Z15]
ATGGCTGGAAATAGAAATAATGATGTGAAAGTTTACTGTTCATTCTGCGGAAAAAGCCAGGATGAGGTAAAGAAAATTAT
TGCTGGCAACAGCGTTTTTATCTGCAATGAATGTGTCGCTTTGTCGCAGGAAATTATCAGAGAAGAGCTGGCCGAGGAAG
TTCTGGCTGATTTGTCAGAAGTTCCTAAGCCAAAAGAACTGCTTGCTATTTTAAATGAGTATGTCGTTGGGCAGGATCAT
GCTAAACGTGCTTTGGCCGTAGCTGTTTACAATCATTACAAGCGAGTTTCTTTTACGGAAAGTCAGGATGACGGAGATGT
TGATTTGCAGAAATCTAACATTCTTATGATTGGTCCGACAGGATCGGGCAAGACTTTTTTAGCTCAAACCTTGGCTAAGA
GCCTGAATGTTCCCTTTGCGATTGCAGATGCTACCTCACTGACAGAAGCAGGGTATGTGGGAGAAGATGTTGAAAACATA
CTCTTAAAGCTGATTCAGGCAGCAGATTTTAATATTGAACGTGCTGAACGCGGTATTATCTATGTCGATGAAATCGATAA
GATTGCTAAAAAAGGGGAAAATGTCTCCATCACACGTGATGTGTCCGGAGAAGGTGTGCAGCAGGCTCTGCTGAAAATTA
TTGAAGGAACTGTAGCCAGTGTTCCGCCTCAGGGCGGCCGTAAGCATCCCAACCAGGAAATGATTCAGATTGACACTAAA
AATATTCTTTTTATTGTCGGCGGAGCTTTTGACGGGATTGAAGATATTGTGAAGCAGCGCTTAGGAGAAAAGGTCATCGG
TTTTGGGCAAAATAATAAACAGCTTTCTGATGGGATTTCCTATATGCAGGAAATTATTTCAGAAGATATTCAGAAATTCG
GTTTGATTCCTGAGTTTATTGGCCGTCTTCCAGTCGTTGCCGCCTTAGAGGAACTGACTGCTGATGACTTGGTACGTATT
CTGACAGAGCCGCGTAATGCCCTTGTAAAACAGTATCAAACCCTTATGTCTTATGACGGTGTGGAATTGGATTTTGATGA
AGCGGCTCTCAAAGCTATTGCTAATAAGGCTATTGAACGTAAAACTGGGGCACGGGGTCTCCGTTCTATCATCGAAGAAA
CGATGCTGGATATTATGTTTGAAATCCCGAGTCAGGAAGAAGTCAGCAAAGTACGGATTACTAAAGAAGCCGTTGACGGT
ACTGACGGGCCGGTTTTAGAAACAGCTTAG

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	89.976	100	0.9
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.288	96.088	0.57