Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   D0B88_RS03560 Genome accession   NZ_CP031727
Coordinates   827986..828381 (-) Length   131 a.a.
NCBI ID   WP_007639219.1    Uniprot ID   -
Organism   Cellvibrio sp. KY-YJ-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 822986..833381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0B88_RS03540 (D0B88_03565) - 823626..824483 (-) 858 WP_151055100.1 protein-glutamate O-methyltransferase CheR -
  D0B88_RS03545 (D0B88_03570) - 824541..826700 (-) 2160 WP_040391078.1 methyl-accepting chemotaxis protein -
  D0B88_RS03550 (D0B88_03575) - 826800..827342 (-) 543 WP_007639224.1 chemotaxis protein CheW -
  D0B88_RS03555 (D0B88_03580) pilH 827467..827829 (-) 363 WP_007639222.1 twitching motility response regulator PilH -
  D0B88_RS03560 (D0B88_03585) pilG 827986..828381 (-) 396 WP_007639219.1 twitching motility response regulator PilG Regulator
  D0B88_RS03565 (D0B88_03590) gshB 828738..829691 (+) 954 WP_040391073.1 glutathione synthase -
  D0B88_RS03570 (D0B88_03595) - 829753..830673 (+) 921 WP_191966511.1 energy transducer TonB -
  D0B88_RS03575 (D0B88_03600) - 830735..831331 (+) 597 WP_007639211.1 YqgE/AlgH family protein -
  D0B88_RS03580 (D0B88_03605) ruvX 831348..831770 (+) 423 WP_151055105.1 Holliday junction resolvase RuvX -
  D0B88_RS03585 (D0B88_03610) - 831804..832568 (-) 765 WP_151055108.1 GNAT family N-acetyltransferase -
  D0B88_RS03590 (D0B88_03615) - 832584..833024 (-) 441 WP_151055111.1 DMT family transporter -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14472.94 Da        Isoelectric Point: 8.4809

>NTDB_id=310759 D0B88_RS03560 WP_007639219.1 827986..828381(-) (pilG) [Cellvibrio sp. KY-YJ-3]
MEVTYESLKVMVIDDSKTIRRTAETLLKKAGCMVITATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
TTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIEAHVKHLKAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=310759 D0B88_RS03560 WP_007639219.1 827986..828381(-) (pilG) [Cellvibrio sp. KY-YJ-3]
ATGGAAGTAACTTACGAAAGCCTCAAAGTGATGGTGATAGACGACAGTAAAACCATCCGTCGCACGGCTGAAACACTGCT
TAAAAAAGCAGGCTGTATGGTGATTACCGCTACCGATGGCTTTGATGCCCTGGCGAAAATTGCCGACACCCGCCCCGATA
TCATCTTTGTCGACATCATGATGCCGCGCCTCGACGGCTATCAAACCTGTGCGTTAATCAAAAATAATAGTGAATTCAAG
ACTACGCCGGTAATCATGTTGTCCAGTAAAGACGGTCTGTTCGACAAAGCCAAAGGGCGTATTGTCGGCTCCGATCAATA
CCTCACCAAACCCTTTAGTAAAAGCGAGTTGCTGGGCGCCATTGAAGCCCATGTCAAGCATTTGAAAGCATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

95.42

0.725
  vicR Streptococcus mutans UA159

43.22

90.076

0.389

Multiple sequence alignment