Detailed information NTG0310695

Bioinformatically predicted

Overview

• Name: comF
• Type: Machinery gene
• Locus tag: BEN71_RS16740
• Genome accession: NZ_CP031716
• Coordinates: 3359261..3359944 (+)
• Length: 227 a.a.
• NCBI ID: WP_068975219.1
• Uniprot ID: -
• Organism: Acinetobacter wuhouensis strain WCHA60
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
ICE	3350104..3364847	3359261..3359944	within	0

Gene organization within MGE regions

Location: 3350104..3364847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN71_RS16705 (BEN71_16705)	plsB	3350779..3353361 (+)	2583	WP_068973562.1	glycerol-3-phosphate 1-O-acyltransferase PlsB	-
BEN71_RS16710 (BEN71_16710)	-	3353444..3353896 (-)	453	WP_068973561.1	hypothetical protein	-
BEN71_RS16715 (BEN71_16715)	-	3353868..3354179 (-)	312	WP_068973560.1	hypothetical protein	-
BEN71_RS16725 (BEN71_16725)	-	3355469..3355984 (-)	516	WP_068975222.1	DUF6731 family protein	-
BEN71_RS16730 (BEN71_16730)	-	3356097..3356855 (-)	759	WP_068975221.1	NAD(P)H-binding protein	-
BEN71_RS16735 (BEN71_16735)	recG	3356915..3358960 (+)	2046	WP_068975220.1	ATP-dependent DNA helicase RecG	-
BEN71_RS16740 (BEN71_16740)	comF	3359261..3359944 (+)	684	WP_068975219.1	ComF family protein	Machinery gene
BEN71_RS16745 (BEN71_16745)	-	3359941..3360333 (-)	393	WP_068975218.1	NUDIX domain-containing protein	-
BEN71_RS16750 (BEN71_16750)	-	3360426..3361022 (-)	597	WP_068975217.1	TIGR00730 family Rossman fold protein	-
BEN71_RS16755 (BEN71_16755)	-	3361181..3362194 (+)	1014	WP_068975216.1	magnesium and cobalt transport protein CorA	-
BEN71_RS16760 (BEN71_16760)	-	3362307..3362594 (-)	288	WP_068975215.1	toluene tolerance protein	-
BEN71_RS16765 (BEN71_16765)	-	3362622..3363245 (-)	624	WP_068975214.1	phospholipid-binding protein MlaC	-
BEN71_RS16770 (BEN71_16770)	-	3363267..3363947 (-)	681	WP_068975213.1	outer membrane lipid asymmetry maintenance protein MlaD	-
BEN71_RS16775 (BEN71_16775)	mlaE	3363947..3364726 (-)	780	WP_068975212.1	lipid asymmetry maintenance ABC transporter permease subunit MlaE	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 26348.35 Da
• Isoelectric Point: 7.7112

>NTDB_id=310695 BEN71_RS16740 WP_068975219.1 3359261..3359944(+) (comF) [Acinetobacter wuhouensis strain WCHA60]
MLSFINQVLHKSVQSISPCLLCGIDRQQQHSLCNDCWEQLPWYKQHIERHEHSILCAHHYDFPIDRIIQTYKYEQQLQYQ
NLLAHSLLNLRTPKVHAIVPMPISTERLKERGYNQMLIIAKIMARELKIPVWQPVIRDAQHSQKGLSRIERLENIENQFQ
IITTEKRKYKKVLIIDDVVTTGSSIHALSQALEKLGCQQIYTACIAAGGIKQSSQLEESEIDAQENN

Nucleotide

• Length: 684 bp

>NTDB_id=310695 BEN71_RS16740 WP_068975219.1 3359261..3359944(+) (comF) [Acinetobacter wuhouensis strain WCHA60]
ATGCTCTCATTCATCAACCAAGTACTCCACAAAAGCGTACAAAGCATCTCCCCTTGCCTACTCTGTGGCATCGACCGCCA
ACAACAGCATTCACTTTGTAACGATTGCTGGGAACAATTGCCGTGGTACAAACAACACATTGAACGTCATGAACACAGCA
TCCTTTGCGCACATCATTACGATTTTCCGATTGATCGAATTATCCAAACCTACAAATACGAACAGCAACTGCAATATCAG
AATCTGCTCGCACACAGCTTACTGAATTTAAGAACTCCCAAAGTTCACGCCATTGTCCCTATGCCTATTTCCACGGAACG
ACTCAAAGAACGGGGTTATAACCAAATGTTAATCATTGCGAAAATCATGGCAAGAGAACTGAAAATCCCTGTATGGCAAC
CCGTGATTCGTGATGCACAACATTCACAAAAAGGCTTAAGTCGGATTGAACGACTGGAAAATATTGAAAACCAATTTCAG
ATCATAACTACAGAAAAACGTAAGTATAAAAAAGTACTGATCATTGATGATGTAGTCACAACAGGAAGTTCGATTCATGC
ACTGAGCCAAGCTTTAGAAAAACTCGGCTGTCAGCAGATTTATACCGCATGTATTGCAGCAGGGGGAATTAAACAATCAT
CTCAACTTGAAGAATCAGAAATCGATGCACAAGAAAATAATTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (118-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comF	Acinetobacter baumannii strain A118	60.952	92.511	0.564
comF	Acinetobacter baumannii D1279779	60.476	92.511	0.559