Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BEN71_RS11530 | Genome accession | NZ_CP031716 |
| Coordinates | 2251307..2251687 (-) | Length | 126 a.a. |
| NCBI ID | WP_068973188.1 | Uniprot ID | - |
| Organism | Acinetobacter wuhouensis strain WCHA60 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2246307..2256687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN71_RS11500 (BEN71_11500) | tadA | 2246364..2246906 (-) | 543 | WP_068973182.1 | tRNA adenosine(34) deaminase TadA | - |
| BEN71_RS11505 (BEN71_11505) | - | 2246912..2248033 (-) | 1122 | WP_068973183.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BEN71_RS11510 (BEN71_11510) | ung | 2248030..2248743 (-) | 714 | WP_068973184.1 | uracil-DNA glycosylase | - |
| BEN71_RS11515 (BEN71_11515) | - | 2248816..2249412 (-) | 597 | WP_068973185.1 | 6-carboxytetrahydropterin synthase | - |
| BEN71_RS11520 (BEN71_11520) | gspK | 2249636..2250598 (-) | 963 | WP_068973186.1 | type II secretion system minor pseudopilin GspK | - |
| BEN71_RS11525 (BEN71_11525) | xcpW | 2250648..2251259 (-) | 612 | WP_068973187.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BEN71_RS11530 (BEN71_11530) | xcpV | 2251307..2251687 (-) | 381 | WP_068973188.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BEN71_RS11535 (BEN71_11535) | - | 2251674..2252240 (-) | 567 | WP_068973189.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| BEN71_RS11540 (BEN71_11540) | - | 2252246..2252860 (-) | 615 | WP_068973190.1 | TetR/AcrR family transcriptional regulator | - |
| BEN71_RS11545 (BEN71_11545) | - | 2252933..2253706 (-) | 774 | WP_068973191.1 | TatD family hydrolase | - |
| BEN71_RS11550 (BEN71_11550) | - | 2253741..2254082 (-) | 342 | WP_068973192.1 | PilZ domain-containing protein | - |
| BEN71_RS11555 (BEN71_11555) | - | 2254120..2255100 (-) | 981 | WP_068973193.1 | DNA polymerase III subunit delta' | - |
| BEN71_RS11560 (BEN71_11560) | kdsB | 2255177..2255938 (-) | 762 | WP_068973194.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13885.22 Da Isoelectric Point: 10.1327
>NTDB_id=310685 BEN71_RS11530 WP_068973188.1 2251307..2251687(-) (xcpV) [Acinetobacter wuhouensis strain WCHA60]
MKKNKAFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANSILRTKAQFVAQNEISRMIINRERLTGTASKQITAQGETWQ
IDKKAEATISPLVQKIDVQVSLFDADAGKVEAGITNMVFFNYVIKE
MKKNKAFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANSILRTKAQFVAQNEISRMIINRERLTGTASKQITAQGETWQ
IDKKAEATISPLVQKIDVQVSLFDADAGKVEAGITNMVFFNYVIKE
Nucleotide
Download Length: 381 bp
>NTDB_id=310685 BEN71_RS11530 WP_068973188.1 2251307..2251687(-) (xcpV) [Acinetobacter wuhouensis strain WCHA60]
ATGAAGAAAAATAAAGCCTTTACCTTAATTGAAGTTGTGGTCGCTTTGGCGATCTTTGCTGTGGCGGCGATGGCATTAAC
CAAAGTGGCGATGCAATATACCCAATCGACCGCCAATTCGATTTTAAGAACCAAAGCACAATTTGTTGCGCAGAATGAAA
TTTCTCGAATGATTATTAACCGTGAAAGGTTAACTGGGACAGCATCAAAACAAATTACGGCACAAGGCGAGACGTGGCAG
ATTGATAAAAAAGCAGAAGCGACGATTAGCCCTTTGGTGCAGAAAATAGATGTACAAGTCAGTTTGTTCGATGCTGATGC
AGGCAAAGTCGAAGCGGGAATTACCAATATGGTGTTTTTTAATTATGTGATTAAAGAATAA
ATGAAGAAAAATAAAGCCTTTACCTTAATTGAAGTTGTGGTCGCTTTGGCGATCTTTGCTGTGGCGGCGATGGCATTAAC
CAAAGTGGCGATGCAATATACCCAATCGACCGCCAATTCGATTTTAAGAACCAAAGCACAATTTGTTGCGCAGAATGAAA
TTTCTCGAATGATTATTAACCGTGAAAGGTTAACTGGGACAGCATCAAAACAAATTACGGCACAAGGCGAGACGTGGCAG
ATTGATAAAAAAGCAGAAGCGACGATTAGCCCTTTGGTGCAGAAAATAGATGTACAAGTCAGTTTGTTCGATGCTGATGC
AGGCAAAGTCGAAGCGGGAATTACCAATATGGTGTTTTTTAATTATGTGATTAAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
74.797 |
97.619 |
0.73 |