Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SaO55_RS06460 Genome accession   NZ_CP038268
Coordinates   1259425..1260711 (+) Length   428 a.a.
NCBI ID   WP_000121113.1    Uniprot ID   -
Organism   Staphylococcus aureus strain O55 isolate B118     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1254425..1265711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO55_RS06430 - 1254820..1254933 (+) 114 WP_001789890.1 hypothetical protein -
  SaO55_RS06435 (SaO55_1197) tsf 1254968..1255849 (+) 882 WP_000201387.1 translation elongation factor Ts -
  SaO55_RS06440 (SaO55_1198) pyrH 1255986..1256708 (+) 723 WP_000057330.1 UMP kinase -
  SaO55_RS06445 (SaO55_1199) frr 1256727..1257281 (+) 555 WP_001280006.1 ribosome recycling factor -
  SaO55_RS06450 (SaO55_1200) - 1257654..1258424 (+) 771 WP_000473705.1 isoprenyl transferase -
  SaO55_RS06455 (SaO55_1201) - 1258431..1259213 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  SaO55_RS06460 (SaO55_1202) eeP 1259425..1260711 (+) 1287 WP_000121113.1 RIP metalloprotease RseP Regulator
  SaO55_RS06465 (SaO55_1203) - 1260731..1262434 (+) 1704 WP_000814100.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48135.51 Da        Isoelectric Point: 9.5401

>NTDB_id=310601 SaO55_RS06460 WP_000121113.1 1259425..1260711(+) (eeP) [Staphylococcus aureus strain O55 isolate B118]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGIQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=310601 SaO55_RS06460 WP_000121113.1 1259425..1260711(+) (eeP) [Staphylococcus aureus strain O55 isolate B118]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCATACAAAAAGGCGATAAAATTGTCCAAATTGGTAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACAACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAAACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAATTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(9-413)

(191-265)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.443

100

0.397

  eeP Streptococcus thermophilus LMG 18311

38.889

100

0.393