Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | D0T92_RS08860 | Genome accession | NZ_CP031700 |
| Coordinates | 1916325..1916876 (-) | Length | 183 a.a. |
| NCBI ID | WP_151052094.1 | Uniprot ID | - |
| Organism | Neisseria zalophi strain ATCC BAA-2455 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1911325..1921876
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T92_RS08835 (D0T92_08895) | - | 1911778..1912974 (+) | 1197 | WP_151052087.1 | acetate kinase | - |
| D0T92_RS08840 (D0T92_08900) | ppx | 1913216..1914715 (+) | 1500 | WP_151052089.1 | exopolyphosphatase | - |
| D0T92_RS08845 (D0T92_08905) | pdxH | 1914884..1915516 (+) | 633 | WP_151052091.1 | pyridoxamine 5'-phosphate oxidase | - |
| D0T92_RS08850 (D0T92_08910) | - | 1915575..1915688 (+) | 114 | Protein_1727 | IS1595 family transposase | - |
| D0T92_RS08855 (D0T92_08915) | - | 1915854..1916312 (-) | 459 | WP_151052093.1 | PilX family type IV pilin | - |
| D0T92_RS08860 (D0T92_08920) | pilK | 1916325..1916876 (-) | 552 | WP_151052094.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| D0T92_RS08865 (D0T92_08925) | - | 1916855..1917850 (-) | 996 | WP_151053043.1 | PilW family protein | - |
| D0T92_RS11610 | pilV | 1917853..1918569 (-) | 717 | WP_225315101.1 | type IV pilus modification protein PilV | - |
| D0T92_RS08875 (D0T92_08935) | pilH | 1918629..1919312 (-) | 684 | WP_151052096.1 | GspH/FimT family pseudopilin | Machinery gene |
| D0T92_RS08880 (D0T92_08940) | dnaB | 1919517..1920926 (-) | 1410 | WP_151052098.1 | replicative DNA helicase | - |
| D0T92_RS08885 (D0T92_08945) | - | 1921151..1921732 (+) | 582 | WP_151052101.1 | superoxide dismutase | - |
Sequence
Protein
Download Length: 183 a.a. Molecular weight: 20480.22 Da Isoelectric Point: 8.7853
>NTDB_id=310561 D0T92_RS08860 WP_151052094.1 1916325..1916876(-) (pilK) [Neisseria zalophi strain ATCC BAA-2455]
MRKPYSLNFMHKSSQQGFSLFIVLMVMIVVAFFVVSVTQSYNTEQRISTNDADHKFASALAEAALRAGERRIAGFYGNII
TFKQNCEEGLCSSANATQKNVGDVRIEADSTGEVAWHRLCDKQTCLELNGKELNNSGVRKKPRYIIEYINTQEDSSMIYR
VTAKAWGKNANTTVTLQSYVSAN
MRKPYSLNFMHKSSQQGFSLFIVLMVMIVVAFFVVSVTQSYNTEQRISTNDADHKFASALAEAALRAGERRIAGFYGNII
TFKQNCEEGLCSSANATQKNVGDVRIEADSTGEVAWHRLCDKQTCLELNGKELNNSGVRKKPRYIIEYINTQEDSSMIYR
VTAKAWGKNANTTVTLQSYVSAN
Nucleotide
Download Length: 552 bp
>NTDB_id=310561 D0T92_RS08860 WP_151052094.1 1916325..1916876(-) (pilK) [Neisseria zalophi strain ATCC BAA-2455]
ATGCGCAAACCGTACTCTTTAAATTTTATGCATAAATCATCACAACAAGGGTTTTCACTCTTTATTGTGTTGATGGTGAT
GATTGTGGTTGCATTTTTCGTGGTAAGCGTTACCCAGTCTTATAATACCGAACAGCGTATCAGTACCAATGATGCCGACC
ATAAGTTTGCTTCTGCGTTGGCAGAGGCAGCATTGCGTGCCGGAGAGCGTAGAATTGCCGGCTTTTATGGAAATATCATT
ACATTTAAGCAAAACTGTGAAGAAGGGCTTTGTTCTTCGGCAAATGCTACGCAAAAAAACGTTGGTGACGTTCGTATAGA
AGCCGATTCTACCGGAGAAGTGGCTTGGCACCGATTGTGTGATAAGCAAACATGTTTGGAATTGAATGGTAAAGAGTTAA
ATAATTCGGGTGTTAGGAAAAAACCACGTTATATTATTGAATATATCAACACGCAGGAAGATAGTTCAATGATATATCGT
GTAACAGCTAAGGCCTGGGGGAAAAATGCCAATACAACGGTAACACTTCAATCTTATGTTTCAGCAAACTAA
ATGCGCAAACCGTACTCTTTAAATTTTATGCATAAATCATCACAACAAGGGTTTTCACTCTTTATTGTGTTGATGGTGAT
GATTGTGGTTGCATTTTTCGTGGTAAGCGTTACCCAGTCTTATAATACCGAACAGCGTATCAGTACCAATGATGCCGACC
ATAAGTTTGCTTCTGCGTTGGCAGAGGCAGCATTGCGTGCCGGAGAGCGTAGAATTGCCGGCTTTTATGGAAATATCATT
ACATTTAAGCAAAACTGTGAAGAAGGGCTTTGTTCTTCGGCAAATGCTACGCAAAAAAACGTTGGTGACGTTCGTATAGA
AGCCGATTCTACCGGAGAAGTGGCTTGGCACCGATTGTGTGATAAGCAAACATGTTTGGAATTGAATGGTAAAGAGTTAA
ATAATTCGGGTGTTAGGAAAAAACCACGTTATATTATTGAATATATCAACACGCAGGAAGATAGTTCAATGATATATCGT
GTAACAGCTAAGGCCTGGGGGAAAAATGCCAATACAACGGTAACACTTCAATCTTATGTTTCAGCAAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
47.03 |
100 |
0.519 |