Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | D0T90_RS07185 | Genome accession | NZ_CP031699 |
| Coordinates | 1553489..1553776 (+) | Length | 95 a.a. |
| NCBI ID | WP_126325826.1 | Uniprot ID | A0A5P3MS29 |
| Organism | Neisseria animalis strain ATCC 49930 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1548489..1558776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T90_RS07185 (D0T90_07450) | comE | 1553489..1553776 (+) | 288 | WP_126325826.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| D0T90_RS07190 (D0T90_07455) | - | 1553856..1554702 (-) | 847 | Protein_1384 | IS630 family transposase | - |
| D0T90_RS07195 (D0T90_07460) | hemA | 1554793..1556046 (-) | 1254 | WP_123796137.1 | glutamyl-tRNA reductase | - |
| D0T90_RS07200 (D0T90_07465) | rpoH | 1556241..1557104 (-) | 864 | WP_123796136.1 | RNA polymerase sigma factor RpoH | - |
| D0T90_RS07205 (D0T90_07470) | - | 1557755..1558771 (-) | 1017 | WP_123796135.1 | FAD-binding oxidoreductase | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 9807.51 Da Isoelectric Point: 10.7076
>NTDB_id=310523 D0T90_RS07185 WP_126325826.1 1553489..1553776(+) (comE) [Neisseria animalis strain ATCC 49930]
MKKFLFGALAALAAGLSLAAVNINTAAQSELEALPGIGPAKAKAIVAYRQQNGGFKTTEELKNVKGIGEGIYGKLKAEVT
VAPVQNKRKAVPASK
MKKFLFGALAALAAGLSLAAVNINTAAQSELEALPGIGPAKAKAIVAYRQQNGGFKTTEELKNVKGIGEGIYGKLKAEVT
VAPVQNKRKAVPASK
Nucleotide
Download Length: 288 bp
>NTDB_id=310523 D0T90_RS07185 WP_126325826.1 1553489..1553776(+) (comE) [Neisseria animalis strain ATCC 49930]
ATGAAAAAATTCCTGTTCGGTGCGCTGGCTGCGTTGGCGGCAGGCTTGTCGTTGGCGGCGGTAAACATCAATACGGCCGC
TCAGAGCGAGTTGGAGGCCCTGCCGGGCATCGGCCCTGCGAAAGCCAAAGCGATTGTGGCCTACCGTCAGCAGAACGGCG
GTTTCAAAACGACGGAAGAGCTGAAGAATGTGAAGGGTATCGGTGAGGGAATTTATGGCAAACTGAAGGCCGAGGTCACG
GTGGCGCCGGTACAGAACAAACGTAAGGCCGTGCCGGCTAGCAAGTAG
ATGAAAAAATTCCTGTTCGGTGCGCTGGCTGCGTTGGCGGCAGGCTTGTCGTTGGCGGCGGTAAACATCAATACGGCCGC
TCAGAGCGAGTTGGAGGCCCTGCCGGGCATCGGCCCTGCGAAAGCCAAAGCGATTGTGGCCTACCGTCAGCAGAACGGCG
GTTTCAAAACGACGGAAGAGCTGAAGAATGTGAAGGGTATCGGTGAGGGAATTTATGGCAAACTGAAGGCCGAGGTCACG
GTGGCGCCGGTACAGAACAAACGTAAGGCCGTGCCGGCTAGCAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
50.602 |
87.368 |
0.442 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.444 |
85.263 |
0.379 |