Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | D0T90_RS06775 | Genome accession | NZ_CP031699 |
| Coordinates | 1463506..1464087 (-) | Length | 193 a.a. |
| NCBI ID | WP_123795521.1 | Uniprot ID | A0A5P3MS37 |
| Organism | Neisseria animalis strain ATCC 49930 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1458506..1469087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T90_RS06755 (D0T90_07010) | - | 1459496..1460014 (-) | 519 | WP_123795525.1 | shikimate kinase | - |
| D0T90_RS06760 (D0T90_07015) | pilQ | 1460135..1462198 (-) | 2064 | WP_123795524.1 | type IV pilus secretin PilQ | Machinery gene |
| D0T90_RS06765 (D0T90_07020) | - | 1462255..1462827 (-) | 573 | WP_123795523.1 | pilus assembly protein PilP | - |
| D0T90_RS06770 (D0T90_07025) | pilO | 1462847..1463506 (-) | 660 | WP_123795522.1 | type 4a pilus biogenesis protein PilO | - |
| D0T90_RS06775 (D0T90_07030) | pilN | 1463506..1464087 (-) | 582 | WP_123795521.1 | PilN domain-containing protein | Machinery gene |
| D0T90_RS06780 (D0T90_07035) | pilM | 1464088..1465200 (-) | 1113 | WP_123795520.1 | type IV pilus assembly protein PilM | - |
| D0T90_RS06785 (D0T90_07040) | - | 1465360..1467759 (+) | 2400 | WP_123795519.1 | penicillin-binding protein 1A | - |
| D0T90_RS06790 (D0T90_07045) | rfaE2 | 1467940..1468458 (+) | 519 | WP_123795573.1 | D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21846.96 Da Isoelectric Point: 9.6084
>NTDB_id=310522 D0T90_RS06775 WP_123795521.1 1463506..1464087(-) (pilN) [Neisseria animalis strain ATCC 49930]
MIEPIKINLLPYRETDRQKRKQQFKILMLVAAATGLCLSAVIYATLNTAIANQENRNRFLESEIAKLDQNLGEIQQLQQE
KADFLSKKQTVEELQRKRYQAARIIDSLNTLTPEQTYLTSLEAEDSSTYKLSGRAANDNKVAVLMRALPASGTFEQPELL
GIKKTGSHQEFSLKIRLTGTPQNRTTLPQEQQP
MIEPIKINLLPYRETDRQKRKQQFKILMLVAAATGLCLSAVIYATLNTAIANQENRNRFLESEIAKLDQNLGEIQQLQQE
KADFLSKKQTVEELQRKRYQAARIIDSLNTLTPEQTYLTSLEAEDSSTYKLSGRAANDNKVAVLMRALPASGTFEQPELL
GIKKTGSHQEFSLKIRLTGTPQNRTTLPQEQQP
Nucleotide
Download Length: 582 bp
>NTDB_id=310522 D0T90_RS06775 WP_123795521.1 1463506..1464087(-) (pilN) [Neisseria animalis strain ATCC 49930]
ATGATAGAACCGATTAAAATCAATCTGCTGCCCTACCGCGAAACCGACAGGCAGAAGCGCAAGCAACAGTTTAAAATCCT
CATGCTGGTCGCGGCAGCGACCGGTTTGTGCCTGAGTGCCGTAATTTACGCCACCCTCAACACCGCCATAGCCAATCAGG
AAAACCGCAACCGCTTTTTGGAAAGCGAAATTGCCAAATTAGACCAAAACTTGGGAGAAATCCAACAGCTTCAGCAAGAA
AAAGCCGATTTTTTAAGCAAAAAGCAAACGGTAGAGGAATTACAGAGAAAACGCTACCAAGCCGCCCGCATCATCGACTC
CCTCAACACGCTGACGCCCGAACAGACCTACCTGACCTCACTGGAAGCGGAAGACTCCTCAACCTACAAATTGAGCGGAC
GCGCAGCAAACGACAACAAAGTCGCCGTACTGATGCGCGCCCTGCCCGCAAGCGGAACATTTGAGCAGCCCGAGCTGCTG
GGCATCAAAAAAACAGGCAGTCACCAAGAGTTCAGCCTGAAAATACGCCTGACCGGCACACCGCAAAACCGGACAACCCT
ACCGCAGGAGCAACAACCGTAA
ATGATAGAACCGATTAAAATCAATCTGCTGCCCTACCGCGAAACCGACAGGCAGAAGCGCAAGCAACAGTTTAAAATCCT
CATGCTGGTCGCGGCAGCGACCGGTTTGTGCCTGAGTGCCGTAATTTACGCCACCCTCAACACCGCCATAGCCAATCAGG
AAAACCGCAACCGCTTTTTGGAAAGCGAAATTGCCAAATTAGACCAAAACTTGGGAGAAATCCAACAGCTTCAGCAAGAA
AAAGCCGATTTTTTAAGCAAAAAGCAAACGGTAGAGGAATTACAGAGAAAACGCTACCAAGCCGCCCGCATCATCGACTC
CCTCAACACGCTGACGCCCGAACAGACCTACCTGACCTCACTGGAAGCGGAAGACTCCTCAACCTACAAATTGAGCGGAC
GCGCAGCAAACGACAACAAAGTCGCCGTACTGATGCGCGCCCTGCCCGCAAGCGGAACATTTGAGCAGCCCGAGCTGCTG
GGCATCAAAAAAACAGGCAGTCACCAAGAGTTCAGCCTGAAAATACGCCTGACCGGCACACCGCAAAACCGGACAACCCT
ACCGCAGGAGCAACAACCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
55.491 |
89.637 |
0.497 |