Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   D0T90_RS04500 Genome accession   NZ_CP031699
Coordinates   978049..978516 (+) Length   155 a.a.
NCBI ID   WP_123795733.1    Uniprot ID   A0A5P3MQK6
Organism   Neisseria animalis strain ATCC 49930     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 973049..983516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0T90_RS04490 (D0T90_04655) - 973190..977416 (+) 4227 WP_123795735.1 translocation/assembly module TamB domain-containing protein -
  D0T90_RS04495 (D0T90_04660) - 977533..977922 (-) 390 WP_123795734.1 hypothetical protein -
  D0T90_RS04500 (D0T90_04665) recX 978049..978516 (+) 468 WP_123795733.1 recombination regulator RecX Regulator
  D0T90_RS04505 (D0T90_04670) rsgA 979082..979948 (-) 867 WP_123795732.1 ribosome small subunit-dependent GTPase A -
  D0T90_RS04510 (D0T90_04675) - 980041..980751 (-) 711 WP_123795731.1 YggS family pyridoxal phosphate-dependent enzyme -
  D0T90_RS04515 (D0T90_04680) pilT 980838..981881 (+) 1044 WP_123795730.1 type IV pilus twitching motility protein PilT Machinery gene
  D0T90_RS04520 (D0T90_04685) - 981978..983207 (+) 1230 WP_123795729.1 PilT/PilU family type 4a pilus ATPase -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 18207.46 Da        Isoelectric Point: 9.2361

>NTDB_id=310508 D0T90_RS04500 WP_123795733.1 978049..978516(+) (recX) [Neisseria animalis strain ATCC 49930]
MKPQKSLRARAMDILSRQEVSRAGLRRKLAPHAESTEELEQVLAEFSERNWQSDERYAEAYIHSKSRLHGTLRLKQALSA
QGIDEEISTRFLPDRDSERQTAAAVLRKKFKQPAADLKEKQKQVRFLAYRGFDMDTIQTALRYAWDEEYWQDGYE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=310508 D0T90_RS04500 WP_123795733.1 978049..978516(+) (recX) [Neisseria animalis strain ATCC 49930]
ATGAAACCACAAAAATCCCTACGCGCCCGCGCGATGGACATTTTATCGCGCCAAGAAGTCAGCCGTGCCGGATTACGGCG
CAAACTCGCTCCCCACGCGGAAAGCACGGAAGAGCTGGAGCAGGTGCTGGCCGAATTCAGCGAGCGCAACTGGCAATCGG
ACGAACGCTACGCCGAAGCCTATATCCACAGCAAAAGCCGTCTGCACGGCACTTTGCGCCTGAAACAAGCCTTATCCGCG
CAAGGCATAGACGAGGAAATCAGCACACGTTTCCTGCCCGACCGAGACAGCGAACGCCAAACGGCAGCGGCGGTATTGCG
GAAAAAGTTCAAACAGCCGGCCGCAGATTTGAAAGAAAAGCAGAAACAAGTACGCTTTCTGGCTTACCGCGGCTTCGATA
TGGATACCATTCAAACCGCATTACGCTACGCATGGGACGAAGAATACTGGCAGGACGGATACGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P3MQK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

79.085

98.71

0.781

Multiple sequence alignment