Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | E4K02_RS12445 | Genome accession | NZ_CP038258 |
| Coordinates | 2533243..2533770 (-) | Length | 175 a.a. |
| NCBI ID | WP_004833663.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 39741 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2528243..2538770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4K02_RS12425 (E4K02_12425) | aroK | 2529122..2529691 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| E4K02_RS12430 (E4K02_12430) | - | 2529703..2531571 (-) | 1869 | Protein_2409 | type IV pilus secretin PilQ | - |
| E4K02_RS12440 (E4K02_12440) | - | 2532881..2533180 (-) | 300 | Protein_2411 | AMIN domain-containing protein | - |
| E4K02_RS12445 (E4K02_12445) | pilP | 2533243..2533770 (-) | 528 | WP_004833663.1 | pilus assembly protein PilP | Machinery gene |
| E4K02_RS12450 (E4K02_12450) | pilO | 2533781..2534521 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| E4K02_RS12455 (E4K02_12455) | pilN | 2534518..2535159 (-) | 642 | WP_000201224.1 | PilN domain-containing protein | Machinery gene |
| E4K02_RS12460 (E4K02_12460) | pilM | 2535159..2536217 (-) | 1059 | WP_166806843.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19465.70 Da Isoelectric Point: 8.9898
>NTDB_id=310464 E4K02_RS12445 WP_004833663.1 2533243..2533770(-) (pilP) [Acinetobacter baumannii strain 39741]
MKIKQITLYVLACTVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTLVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACTVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTLVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=310464 E4K02_RS12445 WP_004833663.1 2533243..2533770(-) (pilP) [Acinetobacter baumannii strain 39741]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTACTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCTTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTACTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCTTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.857 |
100 |
0.989 |
| comL/pilP | Acinetobacter baylyi ADP1 |
71.264 |
99.429 |
0.709 |