Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   DXY22_RS19380 Genome accession   NZ_CP031693
Coordinates   3761922..3762821 (-) Length   299 a.a.
NCBI ID   WP_015251332.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM101393     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3756922..3767821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS19345 (DXY22_03812) mrpE 3757160..3757636 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  DXY22_RS19350 (DXY22_03813) mrpF 3757636..3757920 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  DXY22_RS19355 (DXY22_03814) mnhG 3757904..3758278 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  DXY22_RS19360 (DXY22_03815) yuxO 3758319..3758699 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  DXY22_RS19365 (DXY22_03816) comA 3758718..3759362 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  DXY22_RS19370 (DXY22_03817) comP 3759443..3761752 (-) 2310 WP_015251333.1 two-component system sensor histidine kinase ComP Regulator
  DXY22_RS19375 (DXY22_03818) comX 3761767..3761934 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  DXY22_RS19380 (DXY22_03819) comQ 3761922..3762821 (-) 900 WP_015251332.1 ComX modifying isoprenyl transferase ComQ Regulator
  DXY22_RS19385 (DXY22_03820) degQ 3763006..3763146 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  DXY22_RS19390 - 3763368..3763493 (+) 126 WP_003228793.1 hypothetical protein -
  DXY22_RS19395 (DXY22_03821) - 3763607..3763975 (+) 369 WP_014477834.1 hypothetical protein -
  DXY22_RS19400 (DXY22_03822) pdeH 3763951..3765180 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  DXY22_RS19405 (DXY22_03823) pncB 3765317..3766789 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  DXY22_RS19410 (DXY22_03824) pncA 3766805..3767356 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34188.12 Da        Isoelectric Point: 4.9041

>NTDB_id=310361 DXY22_RS19380 WP_015251332.1 3761922..3762821(-) (comQ) [Bacillus subtilis strain SRCM101393]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGVYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=310361 DXY22_RS19380 WP_015251332.1 3761922..3762821(-) (comQ) [Bacillus subtilis strain SRCM101393]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGTATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATTGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

99.666

100

0.997


Multiple sequence alignment