Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DXY22_RS19370 Genome accession   NZ_CP031693
Coordinates   3759443..3761752 (-) Length   769 a.a.
NCBI ID   WP_015251333.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM101393     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3754443..3766752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS19330 (DXY22_03809) mrpB 3754908..3755339 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  DXY22_RS19335 (DXY22_03810) mrpC 3755339..3755680 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  DXY22_RS19340 (DXY22_03811) mrpD 3755673..3757154 (+) 1482 WP_044052469.1 Na+/H+ antiporter subunit D -
  DXY22_RS19345 (DXY22_03812) mrpE 3757160..3757636 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  DXY22_RS19350 (DXY22_03813) mrpF 3757636..3757920 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  DXY22_RS19355 (DXY22_03814) mnhG 3757904..3758278 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  DXY22_RS19360 (DXY22_03815) yuxO 3758319..3758699 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  DXY22_RS19365 (DXY22_03816) comA 3758718..3759362 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  DXY22_RS19370 (DXY22_03817) comP 3759443..3761752 (-) 2310 WP_015251333.1 two-component system sensor histidine kinase ComP Regulator
  DXY22_RS19375 (DXY22_03818) comX 3761767..3761934 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  DXY22_RS19380 (DXY22_03819) comQ 3761922..3762821 (-) 900 WP_015251332.1 ComX modifying isoprenyl transferase ComQ Regulator
  DXY22_RS19385 (DXY22_03820) degQ 3763006..3763146 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  DXY22_RS19390 - 3763368..3763493 (+) 126 WP_003228793.1 hypothetical protein -
  DXY22_RS19395 (DXY22_03821) - 3763607..3763975 (+) 369 WP_014477834.1 hypothetical protein -
  DXY22_RS19400 (DXY22_03822) pdeH 3763951..3765180 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89260.73 Da        Isoelectric Point: 8.2618

>NTDB_id=310359 DXY22_RS19370 WP_015251333.1 3759443..3761752(-) (comP) [Bacillus subtilis strain SRCM101393]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKIHKNDKSQFMIEEISESSYGQFVGLRQGDIILKINKEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQRYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATLN
LVSFATLTLFSFSAIYLHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMDIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEVGPDWNFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=310359 DXY22_RS19370 WP_015251333.1 3759443..3761752(-) (comP) [Bacillus subtilis strain SRCM101393]
TTGAAGAACTTAATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTTTATATAAGCTATACAACTTATATCAG
TATGAATGGAATTATTATTGGGACTAAGATTCATAAAAATGATAAAAGTCAATTTATGATAGAAGAAATATCGGAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGACATCATATTAAAAATTAATAAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAAGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGCGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAAGATACCTTGGAGAAATAGGTAAAACTTTTTTGAATAGAATTTCTTTTCTTTATA
TCATACCAATATTTAATCTTGGTATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCAACTCTTAAT
TTGGTTTCTTTTGCAACTTTGACTCTATTTTCTTTTTCAGCGATATACTTACATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTCTTTCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATATTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAGTTGGACCGGACTGGAATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATTGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGCGGTAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCCCGGCTAACACGTGATGAAATATCGTGGCTGAAAACACTGTCTTTTTATACAAGTGTGTCCATGGAAAATGTCC
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
CAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGC
GTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACGAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

99.87

100

0.999


Multiple sequence alignment