Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   DXY22_RS15495 Genome accession   NZ_CP031693
Coordinates   3046548..3046844 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain SRCM101393     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3041548..3051844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS15450 (DXY22_03037) tasA 3041956..3042741 (-) 786 WP_015251717.1 biofilm matrix protein TasA -
  DXY22_RS15455 (DXY22_03038) sipW 3042805..3043377 (-) 573 WP_003246088.1 signal peptidase I SipW -
  DXY22_RS15460 (DXY22_03039) tapA 3043361..3044122 (-) 762 WP_015251716.1 amyloid fiber anchoring/assembly protein TapA -
  DXY22_RS15465 (DXY22_03040) yqzG 3044394..3044720 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  DXY22_RS15470 (DXY22_03041) spoIITA 3044762..3044941 (-) 180 WP_029726723.1 YqzE family protein -
  DXY22_RS15475 (DXY22_03042) comGG 3045012..3045386 (-) 375 WP_015251714.1 ComG operon protein ComGG Machinery gene
  DXY22_RS15480 comGF 3045387..3045770 (-) 384 WP_015251713.1 ComG operon protein ComGF Machinery gene
  DXY22_RS15485 (DXY22_03044) comGE 3045796..3046143 (-) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  DXY22_RS15490 (DXY22_03045) comGD 3046127..3046558 (-) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  DXY22_RS15495 (DXY22_03046) comGC 3046548..3046844 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  DXY22_RS15500 (DXY22_03047) comGB 3046858..3047895 (-) 1038 WP_044052501.1 comG operon protein ComGB Machinery gene
  DXY22_RS15505 (DXY22_03048) comGA 3047882..3048952 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  DXY22_RS15510 (DXY22_03050) - 3049165..3049362 (-) 198 WP_014480259.1 CBS domain-containing protein -
  DXY22_RS15515 (DXY22_03051) corA 3049364..3050317 (-) 954 WP_015483432.1 magnesium transporter CorA -
  DXY22_RS15520 (DXY22_03052) yqhB 3050460..3051788 (+) 1329 WP_003230150.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=310342 DXY22_RS15495 WP_003230162.1 3046548..3046844(-) (comGC) [Bacillus subtilis strain SRCM101393]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=310342 DXY22_RS15495 WP_003230162.1 3046548..3046844(-) (comGC) [Bacillus subtilis strain SRCM101393]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment