Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   DXY22_RS01425 Genome accession   NZ_CP031693
Coordinates   284028..284147 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM101393     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 279028..289147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS01405 (DXY22_00272) albG 279192..279893 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  DXY22_RS01410 (DXY22_00273) ywhL 279899..281275 (-) 1377 WP_015250987.1 YncE family protein -
  DXY22_RS01415 (DXY22_00274) ywhK 281314..282669 (-) 1356 WP_015250986.1 YncE family protein -
  DXY22_RS01420 (DXY22_00275) rapF 282899..284044 (+) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  DXY22_RS01425 (DXY22_00276) phrF 284028..284147 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  DXY22_RS01430 (DXY22_00277) ywhH 284245..284707 (+) 463 Protein_285 YbaK/EbsC family protein -
  DXY22_RS01435 (DXY22_00278) speB 284739..285611 (-) 873 WP_015250983.1 agmatinase -
  DXY22_RS01440 (DXY22_00279) speE 285672..286502 (-) 831 WP_003227543.1 spermidine synthase -
  DXY22_RS01445 (DXY22_00280) pbpG 286704..288779 (+) 2076 WP_048654792.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=310293 DXY22_RS01425 WP_009968329.1 284028..284147(+) (phrF) [Bacillus subtilis strain SRCM101393]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=310293 DXY22_RS01425 WP_009968329.1 284028..284147(+) (phrF) [Bacillus subtilis strain SRCM101393]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment