Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DD548_RS03815 | Genome accession | NZ_CP031673 |
| Coordinates | 751975..752370 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain MOZ66 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 746975..757370
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD548_RS03785 (DD548_03785) | - | 748233..748637 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| DD548_RS03790 (DD548_03790) | - | 748975..749067 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| DD548_RS03795 (DD548_03795) | - | 749199..749432 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| DD548_RS03800 (DD548_03800) | murA | 749543..750808 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DD548_RS03805 (DD548_03805) | fabZ | 750842..751282 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DD548_RS03810 (DD548_03810) | - | 751341..751781 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| DD548_RS03815 (DD548_03815) | ssb | 751975..752370 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| DD548_RS03820 (DD548_03820) | sceD | 752759..753454 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| DD548_RS03825 (DD548_03825) | tenA | 753840..754529 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| DD548_RS03830 (DD548_03830) | thiD | 754522..755352 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DD548_RS03835 (DD548_03835) | thiM | 755336..756127 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| DD548_RS03840 (DD548_03840) | thiE | 756129..756770 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=309652 DD548_RS03815 WP_000932694.1 751975..752370(+) (ssb) [Staphylococcus aureus strain MOZ66]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=309652 DD548_RS03815 WP_000932694.1 751975..752370(+) (ssb) [Staphylococcus aureus strain MOZ66]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |