Detailed information NTG0030956

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SSUSC84_RS10230
• Genome accession: NC_012924
• Coordinates: 2082009..2083103 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis SC84
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2077009..2088103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUSC84_RS10205 (SSUSC84_1972)	pgsA	2077528..2078067 (-)	540	WP_012028045.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SSUSC84_RS10210 (SSUSC84_1973)	rodZ	2078077..2078934 (-)	858	WP_012028600.1	cytoskeleton protein RodZ	-
SSUSC84_RS10215 (SSUSC84_1974)	yfmH	2079016..2080299 (-)	1284	WP_012775413.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SSUSC84_RS10220 (SSUSC84_1975)	yfmF	2080296..2081549 (-)	1254	WP_012028048.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SSUSC84_RS10225 (SSUSC84_1976)	yaaA	2081623..2082006 (+)	384	WP_012028049.1	S4 domain-containing protein YaaA	-
SSUSC84_RS10230 (SSUSC84_1977)	recF	2082009..2083103 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
SSUSC84_RS10235 (SSUSC84_1978)	guaB	2083375..2084856 (-)	1482	WP_012028051.1	IMP dehydrogenase	-
SSUSC84_RS10240 (SSUSC84_1979)	trpS	2085088..2086113 (-)	1026	WP_012775414.1	tryptophan--tRNA ligase	-
SSUSC84_RS10245 (SSUSC84_1980)	-	2086468..2087340 (+)	873	WP_012028602.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=30956 SSUSC84_RS10230 WP_012028050.1 2082009..2083103(+) (recF) [Streptococcus suis SC84]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=30956 SSUSC84_RS10230 WP_012028050.1 2082009..2083103(+) (recF) [Streptococcus suis SC84]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442