Detailed information NTG0309519

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: E3U39_RS21195
• Genome accession: NZ_CP038028
• Coordinates: 4202374..4204377 (-)
• Length: 667 a.a.
• NCBI ID: WP_007611727.1
• Uniprot ID: A7Z556
• Organism: Bacillus amyloliquefaciens strain FS1092
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4197374..4209377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3U39_RS21145 (E3U39_21145)	sspO	4197807..4197953 (+)	147	WP_003153982.1	acid-soluble spore protein SspO	-
E3U39_RS21150 (E3U39_21150)	-	4197983..4198129 (+)	147	WP_003153984.1	small acid-soluble spore protein P	-
E3U39_RS21155 (E3U39_21155)	-	4198223..4198594 (+)	372	WP_007410324.1	Hsp20/alpha crystallin family protein	-
E3U39_RS21160 (E3U39_21160)	-	4198842..4199270 (+)	429	WP_007410325.1	DUF2621 domain-containing protein	-
E3U39_RS21165 (E3U39_21165)	-	4199298..4199789 (-)	492	WP_007611735.1	CcdC protein domain-containing protein	-
E3U39_RS21170 (E3U39_21170)	-	4199869..4200231 (-)	363	WP_033574804.1	response regulator	-
E3U39_RS21175 (E3U39_21175)	-	4200316..4201023 (-)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
E3U39_RS21180 (E3U39_21180)	-	4201225..4201398 (+)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
E3U39_RS21185 (E3U39_21185)	-	4201472..4201690 (-)	219	WP_003153994.1	YneF family protein	-
E3U39_RS21190 (E3U39_21190)	sirA	4201776..4202222 (-)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
E3U39_RS21195 (E3U39_21195)	recP/tkt	4202374..4204377 (-)	2004	WP_007611727.1	transketolase	Machinery gene
E3U39_RS21200 (E3U39_21200)	-	4204544..4204777 (-)	234	WP_003153997.1	DUF896 domain-containing protein	-
E3U39_RS21205 (E3U39_21205)	-	4204846..4205496 (-)	651	WP_003153998.1	recombinase family protein	-
E3U39_RS21210 (E3U39_21210)	yneA	4205512..4205823 (-)	312	WP_003154001.1	cell division suppressor protein YneA	-
E3U39_RS21215 (E3U39_21215)	dinR/lexA	4205980..4206600 (+)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
E3U39_RS21220 (E3U39_21220)	-	4206941..4207369 (-)	429	WP_053573359.1	hypothetical protein	-
E3U39_RS21225 (E3U39_21225)	-	4207523..4207972 (+)	450	WP_003154009.1	YndM family protein	-
E3U39_RS21230 (E3U39_21230)	-	4208000..4208830 (-)	831	WP_003154011.1	prohibitin family protein	-
E3U39_RS21635	-	4208817..4208966 (-)	150	WP_007410334.1	hypothetical protein	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72541.75 Da
• Isoelectric Point: 4.9029

>NTDB_id=309519 E3U39_RS21195 WP_007611727.1 4202374..4204377(-) (recP/tkt) [Bacillus amyloliquefaciens strain FS1092]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTESPAALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=309519 E3U39_RS21195 WP_007611727.1 4202374..4204377(-) (recP/tkt) [Bacillus amyloliquefaciens strain FS1092]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATATACGCTGTGGACGAAATTTATGAATGTAAACCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCACAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGTATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCTTTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGTGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGCTCTCCAAACCGTGCGGGCACATCCGGCGTTCACGGCGCTCCGTTAGG
ACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCGTCATTGATGGGTCTTC
CCGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAGGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATATCGTTTCAAAAGCCCAAACGGAATCACCGGCCGCTCTTCTTTTAGCGACAGGT
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCCGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGTTGACCGCGTGAAAAAACTTTTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

3D structure

• AlphaFold DB: A7Z556

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.061	98.951	0.555