Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   E3U39_RS09015 Genome accession   NZ_CP038028
Coordinates   1824715..1825542 (-) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain FS1092     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1819715..1830542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3U39_RS08990 (E3U39_08990) abrB 1822055..1822345 (+) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator
  E3U39_RS08995 (E3U39_08995) rsmI 1822395..1823276 (-) 882 WP_053573815.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  E3U39_RS09000 (E3U39_09000) - 1823251..1823550 (-) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  E3U39_RS09005 (E3U39_09005) - 1823537..1824280 (-) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  E3U39_RS09010 (E3U39_09010) yabA 1824341..1824700 (-) 360 WP_004264720.1 replication initiation-control protein YabA -
  E3U39_RS09015 (E3U39_09015) yaaT 1824715..1825542 (-) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  E3U39_RS09020 (E3U39_09020) holB 1825545..1826534 (-) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  E3U39_RS09025 (E3U39_09025) - 1826546..1826986 (-) 441 WP_004264730.1 DUF327 family protein -
  E3U39_RS09030 (E3U39_09030) darA 1826999..1827328 (-) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  E3U39_RS09035 (E3U39_09035) tmk 1827399..1828037 (-) 639 WP_007409918.1 dTMP kinase -
  E3U39_RS09040 (E3U39_09040) - 1828034..1829467 (-) 1434 WP_053573814.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=309442 E3U39_RS09015 WP_004264723.1 1824715..1825542(-) (yaaT) [Bacillus amyloliquefaciens strain FS1092]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=309442 E3U39_RS09015 WP_004264723.1 1824715..1825542(-) (yaaT) [Bacillus amyloliquefaciens strain FS1092]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTTATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGGCCC
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967

Multiple sequence alignment