Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | E3U39_RS01250 | Genome accession | NZ_CP038028 |
| Coordinates | 308121..309143 (-) | Length | 340 a.a. |
| NCBI ID | WP_012117493.1 | Uniprot ID | A7Z4C8 |
| Organism | Bacillus amyloliquefaciens strain FS1092 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 303121..314143
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3U39_RS01220 (E3U39_01220) | - | 303626..304507 (-) | 882 | WP_053573414.1 | 2-dehydropantoate 2-reductase | - |
| E3U39_RS01225 (E3U39_01225) | - | 304670..305152 (+) | 483 | WP_007611262.1 | N-acetyltransferase | - |
| E3U39_RS01230 (E3U39_01230) | gerR | 305193..305768 (-) | 576 | WP_014417712.1 | sporulation-specific transcriptional regulator GerR | - |
| E3U39_RS01235 (E3U39_01235) | rpmF | 305927..306106 (-) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| E3U39_RS01240 (E3U39_01240) | - | 306128..306646 (-) | 519 | WP_007611260.1 | DUF177 domain-containing protein | - |
| E3U39_RS01245 (E3U39_01245) | - | 306855..308102 (+) | 1248 | WP_021493721.1 | nucleotidyltransferase | - |
| E3U39_RS01250 (E3U39_01250) | sepM | 308121..309143 (-) | 1023 | WP_012117493.1 | SepM family pheromone-processing serine protease | Regulator |
| E3U39_RS01255 (E3U39_01255) | - | 309149..309928 (-) | 780 | WP_014304961.1 | patatin family protein | - |
| E3U39_RS01260 (E3U39_01260) | ylbJ | 310108..311334 (+) | 1227 | WP_053573413.1 | sporulation integral membrane protein YlbJ | - |
| E3U39_RS01265 (E3U39_01265) | coaD | 311353..311835 (-) | 483 | WP_014417707.1 | pantetheine-phosphate adenylyltransferase | - |
| E3U39_RS01270 (E3U39_01270) | rsmD | 311840..312394 (-) | 555 | WP_007409693.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| E3U39_RS01280 (E3U39_01280) | - | 312693..312965 (-) | 273 | WP_014417705.1 | YlbG family protein | - |
| E3U39_RS01285 (E3U39_01285) | ylbF | 313024..313473 (-) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| E3U39_RS01290 (E3U39_01290) | - | 313544..313783 (-) | 240 | WP_003154475.1 | YlbE-like family protein | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37434.97 Da Isoelectric Point: 7.3836
>NTDB_id=309385 E3U39_RS01250 WP_012117493.1 308121..309143(-) (sepM) [Bacillus amyloliquefaciens strain FS1092]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=309385 E3U39_RS01250 WP_012117493.1 308121..309143(-) (sepM) [Bacillus amyloliquefaciens strain FS1092]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCTGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGACGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCTGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGACGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.953 |
100 |
0.394 |