Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   DY470_RS18990 Genome accession   NZ_CP031642
Coordinates   3604933..3606171 (-) Length   412 a.a.
NCBI ID   WP_071736935.1    Uniprot ID   -
Organism   Bacillus anthracis strain MCCC 1A02161     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3599933..3611171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DY470_RS18965 (DY470_18965) spoVS 3600017..3600277 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  DY470_RS18970 (DY470_18970) - 3600426..3601220 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  DY470_RS18975 (DY470_18975) rny 3601386..3602948 (-) 1563 WP_000099773.1 ribonuclease Y -
  DY470_RS18980 (DY470_18980) - 3603430..3603852 (-) 423 Protein_3644 DNA recombination/repair protein RecA -
  DY470_RS18985 (DY470_18985) recA 3604180..3604788 (-) 609 Protein_3645 recombinase RecA -
  DY470_RS18990 (DY470_18990) cinA 3604933..3606171 (-) 1239 WP_071736935.1 competence/damage-inducible protein CinA Machinery gene
  DY470_RS18995 (DY470_18995) pgsA 3606192..3606770 (-) 579 WP_071736934.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  DY470_RS19000 (DY470_19000) - 3606834..3607745 (-) 912 WP_071736933.1 helix-turn-helix domain-containing protein -
  DY470_RS19005 (DY470_19005) - 3607767..3608552 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  DY470_RS19010 (DY470_19010) - 3608692..3608940 (-) 249 WP_000114454.1 DUF3243 domain-containing protein -
  DY470_RS19015 (DY470_19015) - 3609016..3609729 (-) 714 WP_071736932.1 SDR family oxidoreductase -
  DY470_RS19020 (DY470_19020) - 3609833..3611119 (-) 1287 WP_071736931.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45350.56 Da        Isoelectric Point: 4.9577

>NTDB_id=309293 DY470_RS18990 WP_071736935.1 3604933..3606171(-) (cinA) [Bacillus anthracis strain MCCC 1A02161]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLAEELVYDEKALASISDYFKRTGREFTENNKKQALVLDGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVDEAEKLIQHVED
LILERVGEFFYGYDQEFLHDKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LSTDGAVSKECARYLAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=309293 DY470_RS18990 WP_071736935.1 3604933..3606171(-) (cinA) [Bacillus anthracis strain MCCC 1A02161]
ATGAACGCTGAAATCATTGCGGTTGGAACAGAATTATTACTTGGACAAATTGCAAATACGAACGCCCAGTTTTTGTCTGA
AAAGTTAGCTTCAATTGGAATTAACGTGTACTACCATACTGTAGTTGGTGATAATAACAAGCGACTGCAGCAGGCGATTG
AAGTTGCAGAAGAACGTGCGGATATGCTCATTTTCACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAGGAAACA
ATAGCGTCTAGCTTAGCGGAAGAGCTTGTATATGATGAAAAGGCATTAGCATCAATAAGCGATTACTTTAAGCGAACAGG
TCGAGAGTTCACGGAGAATAATAAAAAGCAGGCGCTCGTTTTGGATGGAGCAACTGTATTTGCAAATGATCACGGTATGG
CACCTGGTATGGGATTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAGCCGATGTAT
GTAAGTTATGTGGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGCGTGCTTCGCTTTTTCGGAAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACGAATCCGACAATTGCTCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAACATCAAAATGTTGATGAAGCAGAGAAACTCATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCATGATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGCGGAAAGTTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACATGTACCTGAGGAAGTG
TTGTCTACTGACGGTGCAGTTAGTAAAGAATGTGCCCGTTATCTTGCTGAAAATGTTAAAGAATTATTAAAAGCGGATAT
CGGGATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAACCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGCCAACAAATTAGAGAACGCTCAGCGAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAAATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(257-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.981

100

0.59
  cinA Streptococcus mitis SK321

47.255

100

0.481
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.062

100

0.468
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

41.27

91.748

0.379

Multiple sequence alignment