Detailed information NTG0030812

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BAV_RS02820
• Genome accession: NC_010645
• Coordinates: 588472..589779 (+)
• Length: 435 a.a.
• NCBI ID: WP_041937488.1
• Uniprot ID: -
• Organism: Bordetella avium 197N
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 583472..594779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAV_RS02795 (BAV0560)	-	585302..585706 (+)	405	WP_012416256.1	MOSC N-terminal beta barrel domain-containing protein	-
BAV_RS02800 (BAV0561)	-	585713..586918 (-)	1206	WP_012416257.1	benzoate/H(+) symporter BenE family transporter	-
BAV_RS02805 (BAV0562)	-	586915..587169 (-)	255	WP_012416258.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BAV_RS02810 (BAV0563)	coaD	587221..587724 (-)	504	WP_012416259.1	pantetheine-phosphate adenylyltransferase	-
BAV_RS02815 (BAV0564)	rsmD	587746..588366 (-)	621	WP_012416260.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BAV_RS02820 (BAV0565)	pilA	588472..589779 (+)	1308	WP_041937488.1	signal recognition particle-docking protein FtsY	Machinery gene
BAV_RS02825 (BAV0566)	-	589833..591419 (-)	1587	WP_012416262.1	CYTH and CHAD domain-containing protein	-
BAV_RS02830 (BAV0567)	-	591687..592484 (-)	798	WP_012416263.1	IclR family transcriptional regulator	-
BAV_RS02835	-	592490..592765 (+)	276	WP_127812009.1	hypothetical protein	-
BAV_RS02840 (BAV0569)	ribBA	593118..594284 (+)	1167	WP_012416265.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-

Sequence

Protein

• Length: 435 a.a.
• Molecular weight: 44487.45 Da
• Isoelectric Point: 6.5180

>NTDB_id=30812 BAV_RS02820 WP_041937488.1 588472..589779(+) (pilA) [Bordetella avium 197N]
MFSFFKKKTPPPAAPATPALPPEPVAQPAEPVSPPSIAPAAPPVPAVAPEPPVAVPPAAAPPRPPVAAEPVAVQTAAPAS
PAMPAAPAPLVAEPVAAEAVAALAPPSPPAAQAPAPAAPAPEVPAPEVPAPKKASWLSRLKQGLARTGQSIGGIFVGVKV
DENLFEELESALIMADAGIEATDKLLTALRARVKKERIEDPAQVKAALRQLLADHLKPLERQFDLKRAQPLVVMIAGVNG
AGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVIAQDGGDPAAVAFDAVNAGRARAAGVVMIDTA
GRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVIDGNTGQNALAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGS
QGVRPVPVYWIGVGEGLEDLQPFVAEEFASALLAD

Nucleotide

• Length: 1308 bp

>NTDB_id=30812 BAV_RS02820 WP_041937488.1 588472..589779(+) (pilA) [Bordetella avium 197N]
ATGTTCAGCTTCTTCAAGAAAAAGACCCCTCCGCCCGCCGCGCCAGCCACGCCCGCGCTGCCGCCGGAGCCCGTCGCTCA
GCCCGCCGAGCCTGTCTCGCCGCCTTCCATCGCGCCCGCGGCGCCGCCTGTCCCGGCGGTGGCCCCCGAGCCGCCTGTGG
CGGTTCCGCCTGCTGCCGCGCCGCCTCGCCCGCCGGTCGCGGCCGAGCCCGTGGCGGTTCAGACTGCTGCGCCGGCCTCG
CCCGCGATGCCTGCGGCACCCGCGCCGCTTGTGGCCGAACCCGTAGCCGCCGAAGCGGTGGCGGCCCTTGCGCCGCCCAG
CCCGCCTGCGGCCCAAGCTCCCGCGCCCGCAGCACCGGCACCCGAAGTCCCCGCCCCCGAAGTTCCTGCACCCAAGAAGG
CCTCCTGGCTCAGCCGGCTCAAGCAGGGCCTGGCCCGCACCGGGCAAAGCATCGGCGGCATTTTTGTTGGCGTCAAAGTC
GATGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCCGATGCCGGTATCGAAGCGACCGACAAATTGCTGAC
CGCGCTGCGAGCCCGAGTCAAGAAAGAGCGCATCGAGGACCCTGCGCAGGTCAAGGCCGCTTTGCGCCAGTTGCTGGCCG
ATCACCTCAAACCGCTTGAACGCCAGTTCGACCTCAAGCGTGCGCAGCCGCTGGTCGTGATGATCGCTGGGGTGAACGGC
GCGGGTAAAACCACGTCTATCGGCAAGTTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTTTTGCTGGCTGCGGGAGA
CACGTTCCGCGCCGCCGCGCGCGAGCAACTCGTCGAGTGGGGCAGCCGCAACAACGTCACCGTCATCGCCCAGGATGGCG
GAGATCCGGCCGCCGTGGCCTTTGACGCCGTCAATGCCGGTCGCGCACGCGCTGCAGGCGTGGTCATGATCGACACCGCC
GGGCGCCTGCCTACGCAACTGCATTTGATGGAAGAGCTCAAGAAAATCCGTCGCGTTATCGGCAAGGCCGACGCCGCCGC
GCCGCATGAGGTCTTGCTGGTCATCGACGGCAATACCGGGCAGAACGCCCTGGCTCAGATTCGCGCCTTTGATGCGGCCA
TTCAGCTCACCGGCCTGGTCGTCACCAAGCTCGATGGCACCGCCAAGGGCGGCACGCTGGCGGCTGTCGCCGCGGGCAGC
CAGGGCGTGCGCCCTGTGCCGGTTTACTGGATAGGCGTGGGCGAAGGTCTGGAAGACCTCCAACCCTTTGTGGCCGAGGA
GTTTGCCTCGGCCTTGCTGGCAGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (231-433)

• SRP54-type protein, helical bundle domain (SRP54_N) (149-210)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.955	100	0.485