Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   A2J15_RS03650 Genome accession   NZ_CP031611
Coordinates   739511..740161 (+) Length   216 a.a.
NCBI ID   WP_066776533.1    Uniprot ID   A0A424Z180
Organism   Campylobacter hepaticus strain HV10     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 734511..745161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2J15_RS03630 (A2J15_003630) - 735454..736821 (-) 1368 WP_066776542.1 MotA/TolQ/ExbB proton channel family protein -
  A2J15_RS03635 (A2J15_003635) fbaA 736922..737986 (-) 1065 WP_066776539.1 class II fructose-bisphosphate aldolase -
  A2J15_RS03640 (A2J15_003640) - 737986..738807 (-) 822 WP_066776537.1 peptidylprolyl isomerase -
  A2J15_RS03645 (A2J15_003645) nth 738888..739514 (+) 627 WP_066776535.1 endonuclease III -
  A2J15_RS03650 (A2J15_003650) CJE0566 739511..740161 (+) 651 WP_066776533.1 DNA/RNA non-specific endonuclease Regulator
  A2J15_RS03655 (A2J15_003655) - 740172..740804 (+) 633 WP_066776530.1 trimeric intracellular cation channel family protein -
  A2J15_RS03660 (A2J15_003660) - 740864..741370 (+) 507 WP_066776528.1 EexN family lipoprotein -
  A2J15_RS03665 (A2J15_003665) - 741367..741582 (+) 216 WP_066776525.1 EexN family lipoprotein -
  A2J15_RS03670 (A2J15_003670) cmoA 741572..742279 (-) 708 WP_066776522.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  A2J15_RS03675 (A2J15_003675) - 742279..743124 (-) 846 WP_083074264.1 bifunctional riboflavin kinase/FAD synthetase -
  A2J15_RS03680 (A2J15_003680) - 743090..743851 (-) 762 WP_066776519.1 TlyA family RNA methyltransferase -
  A2J15_RS03685 (A2J15_003685) - 743848..744852 (-) 1005 WP_116980518.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25666.64 Da        Isoelectric Point: 9.8644

>NTDB_id=307929 A2J15_RS03650 WP_066776533.1 739511..740161(+) (CJE0566) [Campylobacter hepaticus strain HV10]
MKILIVLLILYLKSFAFEHYKPSAEFASYFNPINCSQILDKFFYLNCYDYKLKGTKAIAYQVEAKNFKNKQIKKRPRFED
DTNIPKKYRTTWSDYKNSGYTRGHTAPNASFNFNKAAQNSVFLMSNITPQNEQINNKIWNEIEQKERILALKFHSIEVLN
LVLYDKNPQFIKNHIAIPFSYIKIIKTPKFKECYKVPNHEVENEDINKYKINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=307929 A2J15_RS03650 WP_066776533.1 739511..740161(+) (CJE0566) [Campylobacter hepaticus strain HV10]
ATGAAAATATTGATTGTATTATTAATTTTATATTTAAAAAGTTTTGCCTTTGAACATTATAAACCTAGTGCTGAATTTGC
TTCTTATTTTAACCCTATTAATTGTTCTCAAATTTTAGATAAATTTTTTTATTTAAATTGTTACGATTATAAACTTAAAG
GCACTAAAGCCATAGCTTACCAAGTAGAAGCTAAAAATTTTAAAAATAAACAAATTAAAAAACGTCCACGCTTTGAAGAT
GATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAATAGCGGCTACACACGAGGACATACCGCACC
AAATGCCTCATTTAATTTTAATAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACTCCACAAAATGAACAAA
TTAATAATAAAATTTGGAATGAAATTGAACAAAAAGAGAGAATTTTGGCTTTAAAATTTCATAGCATTGAAGTTTTAAAT
CTAGTCCTTTATGATAAAAATCCACAATTTATTAAAAATCATATTGCTATACCTTTTTCTTATATTAAAATCATCAAAAC
CCCAAAATTTAAAGAATGTTATAAAGTGCCAAATCATGAAGTTGAAAACGAAGATATCAATAAATATAAAATAAATTGTG
ATAAATTTTAG

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(25-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A424Z180

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

69.608

94.444

0.657
  CJE1441 Campylobacter jejuni RM1221

68.627

94.444

0.648

Multiple sequence alignment