Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   AB849_RS10195 Genome accession   NZ_CP036487
Coordinates   1978711..1979976 (+) Length   421 a.a.
NCBI ID   WP_049720232.1    Uniprot ID   A0ABS0QHF4
Organism   Thermoactinomyces vulgaris strain CDF     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1973711..1984976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB849_RS10170 (AB849_010170) pyrH 1974477..1975202 (+) 726 WP_037997206.1 UMP kinase -
  AB849_RS10175 (AB849_010175) frr 1975207..1975761 (+) 555 WP_037997203.1 ribosome recycling factor -
  AB849_RS10180 (AB849_010180) - 1975892..1976674 (+) 783 WP_037997201.1 isoprenyl transferase -
  AB849_RS10185 (AB849_010185) - 1976694..1977491 (+) 798 WP_037997197.1 phosphatidate cytidylyltransferase -
  AB849_RS10190 (AB849_010190) - 1977512..1978669 (+) 1158 WP_037997195.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AB849_RS10195 (AB849_010195) eeP 1978711..1979976 (+) 1266 WP_049720232.1 RIP metalloprotease RseP Regulator
  AB849_RS10200 (AB849_010200) - 1980104..1981822 (+) 1719 WP_049720231.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46740.39 Da        Isoelectric Point: 5.5164

>NTDB_id=307923 AB849_RS10195 WP_049720232.1 1978711..1979976(+) (eeP) [Thermoactinomyces vulgaris strain CDF]
MQTIVIFVLVLSLLVFVHELGHFIFAKRAGILVREFAIGFGPKLFATKRGETLYSIRILPLGGYVRMAGEDAEMVEIKTG
TMVYATQTPEGKLNHLYLYDPQGLETESLIVGRLVKADLERQLYVVLEDSDENEAKYFLDPQANIHYSEKTELQIAPYDR
QFGSKTAGQKAMTIFAGPLFNIALTIILFAIYTFVTGIEDRLPVDQAIPDSPAAKAGIRENDLIVAINGKKVNTMDSLRY
ELLESKGETVTITVDRNGQKLDFPVTPQKSGEVYQIGVYFNVNEMKRDATLWEAAIDGFRQTYDWSVMIMDGFGKLVTGQ
LGLKSLGGPVQMGSITGEAAKAGYESLIRWTALLSLNLGIFNLLPIPALDGSRLVFIGIEAVRGRPISPNKESLVHFIGF
ALLMMLMLVVTFNDIKKVFFT

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=307923 AB849_RS10195 WP_049720232.1 1978711..1979976(+) (eeP) [Thermoactinomyces vulgaris strain CDF]
ATGCAAACCATAGTGATATTTGTGTTGGTCCTGAGTTTACTTGTCTTTGTACATGAACTGGGACATTTTATCTTTGCAAA
ACGTGCAGGGATTCTGGTGCGGGAATTTGCCATCGGTTTCGGGCCGAAACTTTTTGCAACCAAACGAGGGGAAACGCTTT
ATTCCATCCGGATTTTGCCCTTGGGCGGTTATGTCCGCATGGCTGGTGAAGATGCGGAGATGGTTGAAATCAAAACGGGG
ACGATGGTTTATGCGACCCAAACTCCGGAGGGGAAACTGAACCATTTGTACCTGTATGATCCGCAAGGGTTGGAAACAGA
GTCTCTGATTGTCGGAAGGCTTGTGAAAGCGGATTTGGAAAGACAGCTGTATGTGGTGCTGGAAGATTCCGATGAAAATG
AAGCAAAATATTTCCTGGATCCGCAAGCCAATATTCATTACAGTGAAAAAACGGAACTGCAAATTGCGCCGTATGACCGC
CAGTTTGGCTCCAAAACTGCCGGACAAAAGGCGATGACCATTTTTGCCGGCCCGCTGTTTAATATTGCGTTGACCATTAT
TCTGTTTGCCATCTACACATTTGTAACCGGAATCGAAGATCGGTTGCCGGTTGATCAGGCCATTCCGGATTCACCGGCAG
CCAAGGCCGGGATCCGGGAAAATGATTTGATTGTGGCCATTAACGGCAAAAAAGTGAATACCATGGATTCGTTGCGGTAT
GAGTTGTTGGAATCCAAAGGGGAAACGGTGACCATTACGGTGGACAGAAACGGACAAAAACTGGATTTTCCGGTGACACC
GCAAAAAAGCGGGGAAGTCTACCAAATCGGGGTTTATTTTAATGTCAATGAGATGAAAAGAGACGCCACCCTTTGGGAAG
CAGCCATTGACGGGTTCAGGCAGACGTATGATTGGTCTGTCATGATCATGGACGGATTCGGGAAGTTGGTGACCGGACAG
CTGGGTCTGAAAAGTTTGGGCGGGCCTGTCCAGATGGGTTCCATCACCGGTGAGGCGGCTAAGGCCGGATATGAATCACT
CATCCGTTGGACCGCTCTTTTGAGCCTGAATCTGGGGATTTTTAATCTGTTGCCGATCCCGGCTTTGGATGGAAGCCGTC
TGGTTTTCATCGGGATCGAGGCGGTTCGCGGCCGTCCGATCAGTCCGAACAAGGAAAGTCTGGTTCACTTTATTGGGTTC
GCTTTACTGATGATGTTGATGCTCGTGGTGACTTTTAATGACATAAAAAAAGTGTTCTTCACTTGA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(204-256)

Peptidase family M50 (Peptidase_M50)

(7-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

40.093

100

0.409
  eeP Streptococcus thermophilus LMD-9

39.86

100

0.406