Detailed information NTG0307922

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A2J15_RS01235
• Genome accession: NZ_CP031611
• Coordinates: 249948..250901 (-)
• Length: 317 a.a.
• NCBI ID: WP_066776437.1
• Uniprot ID: A0A6A7JTP4
• Organism: Campylobacter hepaticus strain HV10
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 244948..255901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2J15_RS01210 (A2J15_001210)	gmhA	245392..245952 (+)	561	WP_066776426.1	D-sedoheptulose 7-phosphate isomerase	-
A2J15_RS01215 (A2J15_001215)	-	246051..246719 (-)	669	WP_066776429.1	cytidylyltransferase domain-containing protein	-
A2J15_RS01220 (A2J15_001220)	neuC	246783..247898 (-)	1116	WP_066776431.1	UDP-N-acetylglucosamine 2-epimerase	-
A2J15_RS01225 (A2J15_001225)	-	247895..248935 (-)	1041	WP_066776433.1	N-acetylneuraminate synthase family protein	-
A2J15_RS01230 (A2J15_001230)	-	248932..249822 (-)	891	WP_066776435.1	alpha-2,3-sialyltransferase	-
A2J15_RS01235 (A2J15_001235)	waaF	249948..250901 (-)	954	WP_066776437.1	lipopolysaccharide heptosyltransferase II	Regulator
A2J15_RS01240 (A2J15_001240)	-	250961..251785 (+)	825	WP_066776439.1	glycosyltransferase family 2 protein	-
A2J15_RS01245 (A2J15_001245)	-	251769..252638 (+)	870	WP_116980463.1	glycosyltransferase	-
A2J15_RS01250 (A2J15_001250)	-	252647..253762 (-)	1116	WP_116980464.1	glycosyltransferase	-
A2J15_RS01255 (A2J15_001255)	-	253829..254773 (+)	945	WP_066778115.1	glycosyltransferase family 2 protein	-
A2J15_RS07950	-	254770..255085 (+)	316	Protein_243	glycosyltransferase family 2 protein	-
A2J15_RS07610	-	255333..255728 (+)	396	WP_083074287.1	hypothetical protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36233.96 Da
• Isoelectric Point: 10.3716

>NTDB_id=307922 A2J15_RS01235 WP_066776437.1 249948..250901(-) (waaF) [Campylobacter hepaticus strain HV10]
MKILIHLPTWLGDAVMASSALYGILNHFKNAHFILYGSFASTALFKEFPNAQIIIENRKTRYKQALILRNQLGKIDLGIS
FKSAFSSKIILHIFKIQQRFFFNKYKFKEEHQVLKYLYFIENSLSCKIDSKQLQLPFKLKSKAPLVLKNGKKILGLNPGA
HFGSAKRWDANYFATVALNFAKTHEILIFGAGKTEQELCDKIASILQKSNIKVKNLCNKTSIKRLCQNIAFCDIFITNDS
GPMHISAAYKIKTVAIFGPTKFTQTSPWQNENAKLVHLNLDCMPCMQKICPLKHHKCMQDLKPQMVIEEVKKLISIF

Nucleotide

• Length: 954 bp

>NTDB_id=307922 A2J15_RS01235 WP_066776437.1 249948..250901(-) (waaF) [Campylobacter hepaticus strain HV10]
ATGAAAATTCTTATTCATCTTCCAACTTGGCTAGGTGATGCAGTTATGGCTTCATCGGCTTTATATGGTATTTTAAATCA
TTTTAAAAATGCACACTTTATCCTTTATGGATCTTTTGCTTCAACAGCATTGTTTAAAGAATTTCCTAATGCACAAATTA
TAATAGAAAATAGAAAAACACGCTACAAACAAGCTTTAATTTTACGTAATCAACTTGGCAAAATTGATCTTGGTATTTCT
TTTAAATCAGCCTTTTCTTCTAAAATCATTTTACATATTTTTAAAATACAACAAAGATTTTTTTTCAATAAATACAAATT
TAAAGAAGAGCATCAAGTTTTAAAATATCTTTATTTTATAGAAAATTCACTCTCTTGTAAAATTGATTCTAAACAATTAC
AACTTCCTTTTAAATTAAAATCTAAAGCTCCTCTTGTATTAAAAAATGGTAAAAAAATTTTAGGTTTAAATCCAGGTGCG
CATTTTGGAAGCGCGAAAAGATGGGATGCAAATTATTTTGCAACAGTAGCTTTAAATTTTGCCAAAACACATGAAATTTT
AATCTTTGGCGCAGGAAAAACTGAGCAAGAACTTTGTGATAAAATTGCTAGTATTTTACAAAAATCAAATATCAAGGTTA
AAAATCTTTGCAATAAAACTAGCATTAAAAGACTTTGTCAAAATATAGCTTTTTGTGATATTTTTATCACTAATGATAGC
GGTCCTATGCACATTAGTGCTGCATATAAAATTAAAACCGTAGCTATTTTTGGCCCAACAAAATTTACCCAAACCTCACC
CTGGCAAAATGAAAATGCTAAATTAGTACATCTTAATCTTGATTGCATGCCTTGTATGCAAAAAATTTGCCCTTTAAAAC
ATCACAAATGTATGCAAGATTTAAAACCTCAAATGGTTATAGAAGAAGTTAAAAAATTAATTTCTATTTTTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (102-294)

3D structure

• AlphaFold DB: A0A6A7JTP4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	77.707	99.054	0.77