Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | L3107_RS11565 | Genome accession | NZ_CP031538 |
| Coordinates | 2237045..2237536 (-) | Length | 163 a.a. |
| NCBI ID | WP_015082943.1 | Uniprot ID | A0A166XX03 |
| Organism | Lactococcus cremoris strain 3107 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2232045..2242536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3107_RS11565 (L3107_2256) | comX | 2237045..2237536 (-) | 492 | WP_015082943.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| L3107_RS11570 (L3107_2257) | ezrA | 2237800..2239530 (-) | 1731 | WP_021164853.1 | septation ring formation regulator EzrA | - |
| L3107_RS11575 (L3107_2258) | tsf | 2239734..2240762 (-) | 1029 | WP_011677206.1 | translation elongation factor Ts | - |
| L3107_RS11580 (L3107_2259) | rpsB | 2240884..2241651 (-) | 768 | WP_011836067.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 19661.45 Da Isoelectric Point: 6.0256
>NTDB_id=307381 L3107_RS11565 WP_015082943.1 2237045..2237536(-) (comX) [Lactococcus cremoris strain 3107]
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
Nucleotide
Download Length: 492 bp
>NTDB_id=307381 L3107_RS11565 WP_015082943.1 2237045..2237536(-) (comX) [Lactococcus cremoris strain 3107]
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Lactococcus lactis subsp. cremoris KW2 |
98.773 |
100 |
0.988 |
| comX | Lactococcus lactis subsp. lactis strain DGCC12653 |
75.46 |
100 |
0.755 |