Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   L3107_RS11470 Genome accession   NZ_CP031538
Coordinates   2215534..2216820 (-) Length   428 a.a.
NCBI ID   WP_011677189.1    Uniprot ID   A0A165FD42
Organism   Lactococcus cremoris strain 3107     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2210534..2221820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3107_RS14050 - 2211040..2211633 (-) 594 Protein_2237 PolC-type DNA polymerase III N-terminal domain-containing protein -
  L3107_RS13850 (L3107_2238) - 2211807..2211998 (-) 192 WP_021211222.1 hypothetical protein -
  L3107_RS11460 (L3107_2239) - 2212267..2213598 (-) 1332 WP_021164971.1 FAD/NAD(P)-binding oxidoreductase -
  L3107_RS11465 (L3107_2240) - 2213614..2215464 (-) 1851 WP_011836051.1 proline--tRNA ligase -
  L3107_RS11470 (L3107_2241) eeP 2215534..2216820 (-) 1287 WP_011677189.1 RIP metalloprotease RseP Regulator
  L3107_RS11475 (L3107_2242) - 2216839..2217642 (-) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  L3107_RS11480 (L3107_2243) - 2217642..2218376 (-) 735 WP_021164970.1 isoprenyl transferase -
  L3107_RS11485 (L3107_2244) yajC 2218726..2219058 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -
  L3107_RS11490 (L3107_2245) - 2219219..2219851 (-) 633 WP_011677193.1 DNA alkylation repair protein -
  L3107_RS11495 (L3107_2246) rlmH 2219869..2220348 (-) 480 WP_021164969.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46441.01 Da        Isoelectric Point: 6.5140

>NTDB_id=307379 L3107_RS11470 WP_011677189.1 2215534..2216820(-) (eeP) [Lactococcus cremoris strain 3107]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=307379 L3107_RS11470 WP_011677189.1 2215534..2216820(-) (eeP) [Lactococcus cremoris strain 3107]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCAAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCGATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A165FD42

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563

  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561


Multiple sequence alignment