Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   L3107_RS09045 Genome accession   NZ_CP031538
Coordinates   1775950..1776651 (-) Length   233 a.a.
NCBI ID   WP_021165662.1    Uniprot ID   -
Organism   Lactococcus cremoris strain 3107     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1770950..1781651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3107_RS09025 (L3107_1767) - 1771060..1772280 (-) 1221 WP_021213770.1 cysteine desulfurase -
  L3107_RS09030 (L3107_1768) sufD 1772280..1773539 (-) 1260 WP_277949179.1 Fe-S cluster assembly protein SufD -
  L3107_RS09035 (L3107_1769) sufC 1773676..1774446 (-) 771 WP_011676800.1 Fe-S cluster assembly ATPase SufC -
  L3107_RS09040 (L3107_1770) - 1774622..1775947 (-) 1326 WP_021165661.1 MraY family glycosyltransferase -
  L3107_RS09045 (L3107_1771) mecA 1775950..1776651 (-) 702 WP_021165662.1 adaptor protein MecA Regulator
  L3107_RS09050 (L3107_1772) - 1776779..1777513 (-) 735 WP_021165663.1 amino acid ABC transporter ATP-binding protein -
  L3107_RS09055 (L3107_1773) - 1777513..1778199 (-) 687 WP_014572148.1 amino acid ABC transporter permease -
  L3107_RS09060 (L3107_1774) - 1778345..1779253 (-) 909 WP_014572147.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 26988.43 Da        Isoelectric Point: 4.2010

>NTDB_id=307364 L3107_RS09045 WP_021165662.1 1775950..1776651(-) (mecA) [Lactococcus cremoris strain 3107]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGAKKAEAEHEPDFIYYSIRYDDMMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKAKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLITTRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=307364 L3107_RS09045 WP_021165662.1 1775950..1776651(-) (mecA) [Lactococcus cremoris strain 3107]
ATGAAGTATGAGGATATAAATGAAAACACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAGTT
ATCTGACTTTTTTGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTAGTTGATGAACTTGGCTTAGAAAATCGTT
TTGGAAATGTAGGGATGTTAACTTTCCAAATTCAACCCTTCCCACAAGGCGTCCATATGATTGTTCATGAAGAAGCAATG
TTGGGTGAAGGCGGAGAGATTCCAGATGATCCTGAAGAATTTGAAGAATTAATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGACTTGGTTTACCAGGGGCTAAAAAAGCAG
AAGCCGAACATGAGCCAGACTTTATATACTACTCTATTCGTTATGATGACATGATGTCTGTCTTGACTGGAATAAAAAAT
GTGAAATTCGCAGATGAAGAGTCAGAATTTTATCGTTATGATGGTAATTTTTATCTTGTTGTTTTAGATAATCAAAAAGC
AAAAGGTAAAATGCATGTTGAAAGCACACGTTCACGGATGATGGAATATGGTGAAGCGACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGCCTAATCACAACGCGTGCTTTAGACGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

99.571

100

0.996
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

96.567

100

0.966

Multiple sequence alignment