Detailed information NTG0307350

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: L3107_RS05770
• Genome accession: NZ_CP031538
• Coordinates: 1109538..1110188 (-)
• Length: 216 a.a.
• NCBI ID: WP_064305105.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain 3107
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1104538..1115188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3107_RS05740 (L3107_1114)	-	1104729..1106261 (+)	1533	WP_015082368.1	Nramp family divalent metal transporter	-
L3107_RS05745 (L3107_1115)	-	1106350..1107303 (+)	954	WP_032940546.1	PhoH family protein	-
L3107_RS05750 (L3107_1116)	-	1107373..1107867 (+)	495	WP_011676092.1	NUDIX hydrolase	-
L3107_RS05755 (L3107_1117)	ybeY	1107958..1108446 (+)	489	WP_021165233.1	rRNA maturation RNase YbeY	-
L3107_RS05760 (L3107_1118)	-	1108430..1108885 (+)	456	WP_011676094.1	diacylglycerol kinase	-
L3107_RS05765 (L3107_1119)	-	1108902..1109480 (+)	579	WP_081146242.1	nucleotidyltransferase family protein	-
L3107_RS05770 (L3107_1120)	comFC	1109538..1110188 (-)	651	WP_064305105.1	ComF family protein	Machinery gene
L3107_RS13690 (L3107_1121)	comFA	1110188..1110700 (-)	513	WP_228764428.1	helicase-related protein	Machinery gene
L3107_RS13695 (L3107_1122)	comFA	1110697..1111482 (-)	786	WP_021214114.1	DEAD/DEAH box helicase family protein	Machinery gene
L3107_RS05780 (L3107_1123)	-	1111539..1112174 (+)	636	WP_011676097.1	YigZ family protein	-
L3107_RS05790 (L3107_1124)	istA	1112392..1113615 (+)	1224	WP_003331415.1	IS21-like element IS712 family transposase	-
L3107_RS05795 (L3107_1125)	istB	1113627..1114385 (+)	759	WP_015081777.1	IS21-like element IS712 family helper ATPase IstB	-
L3107_RS05800 (L3107_1126)	-	1114468..1114884 (+)	417	WP_021165237.1	VanZ family protein	-

Sequence

Protein

• Length: 216 a.a.
• Molecular weight: 25316.58 Da
• Isoelectric Point: 9.7533

>NTDB_id=307350 L3107_RS05770 WP_064305105.1 1109538..1110188(-) (comFC) [Lactococcus cremoris strain 3107]
MQTCLLCSRIIKQTLTFSEFFLLKNNRNLICNKCQSLFKKIPNERCPRCSKSNSKGICADCLKWEEKGIIVNHQSIFIYN
QAMKDYFSLYKFMGDYRLHEVFDSYFKNLSKKIPLVPIPVSPKRLQERGFNQVTDFLKDRAYLDLLEKEDTVRQSSLNRE
GRLSTSNPFKLKEGEKIPQKIILIDDIYTTVTTFYHAIKTLKKANPIEITTFSLCR

Nucleotide

• Length: 651 bp

>NTDB_id=307350 L3107_RS05770 WP_064305105.1 1109538..1110188(-) (comFC) [Lactococcus cremoris strain 3107]
ATGCAAACTTGTCTGCTTTGTTCCAGAATTATCAAACAAACACTCACTTTTAGTGAATTCTTTTTACTAAAGAATAACAG
AAATTTAATATGCAATAAATGCCAATCACTGTTTAAAAAAATTCCTAACGAACGTTGTCCTCGTTGCTCTAAATCTAACT
CTAAAGGTATATGTGCTGACTGTCTCAAGTGGGAAGAAAAAGGAATCATTGTTAATCATCAGTCAATTTTTATTTATAAC
CAAGCAATGAAGGATTACTTTAGTCTTTACAAATTTATGGGAGATTATCGATTACACGAAGTCTTCGATTCCTATTTTAA
AAATTTGTCCAAAAAAATTCCTCTGGTTCCCATTCCGGTTTCTCCTAAAAGATTACAAGAAAGAGGTTTTAACCAAGTAA
CAGATTTTCTAAAAGATAGAGCTTATCTTGATTTGCTTGAAAAAGAGGATACTGTCAGACAATCAAGTCTTAATCGCGAG
GGACGTCTATCAACTAGCAATCCTTTTAAGTTGAAAGAGGGTGAAAAAATACCCCAAAAAATCATTTTGATTGATGATAT
TTATACAACTGTAACTACTTTTTATCATGCAATAAAAACCTTAAAGAAAGCTAATCCGATTGAAATTACAACTTTTTCAC
TCTGCCGTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Lactococcus lactis subsp. cremoris KW2	97.015	62.037	0.602
comFC/cflB	Streptococcus mitis NCTC 12261	49.083	100	0.495
comFC/cflB	Streptococcus pneumoniae Rx1	46.789	100	0.472
comFC/cflB	Streptococcus pneumoniae D39	46.789	100	0.472
comFC/cflB	Streptococcus pneumoniae R6	46.789	100	0.472
comFC/cflB	Streptococcus pneumoniae TIGR4	46.789	100	0.472
comFC/cflB	Streptococcus mitis SK321	46.789	100	0.472
comFC	Bacillus subtilis subsp. subtilis str. 168	34.361	100	0.361