Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | DVV14_RS09500 | Genome accession | NZ_CP031472 |
| Coordinates | 2104568..2105173 (+) | Length | 201 a.a. |
| NCBI ID | WP_006958122.1 | Uniprot ID | A0A2A2CS00 |
| Organism | Vibrio coralliilyticus strain RE22 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2099568..2110173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DVV14_RS09480 (DVV14_09535) | - | 2099874..2100788 (-) | 915 | WP_064488035.1 | ABC transporter ATP-binding protein | - |
| DVV14_RS09485 (DVV14_09540) | - | 2100989..2102659 (-) | 1671 | WP_021457058.1 | SulP family inorganic anion transporter | - |
| DVV14_RS09490 (DVV14_09545) | can | 2103014..2103673 (+) | 660 | WP_006958120.1 | carbonate dehydratase | - |
| DVV14_RS09495 (DVV14_09550) | hpt | 2103731..2104261 (-) | 531 | WP_006958121.1 | hypoxanthine phosphoribosyltransferase | - |
| DVV14_RS09500 (DVV14_09555) | opaR | 2104568..2105173 (+) | 606 | WP_006958122.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| DVV14_RS09505 (DVV14_09560) | lpdA | 2105291..2106721 (-) | 1431 | WP_006958123.1 | dihydrolipoyl dehydrogenase | - |
| DVV14_RS09510 (DVV14_09565) | aceF | 2106977..2108866 (-) | 1890 | WP_064488036.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23243.41 Da Isoelectric Point: 5.2990
>NTDB_id=307049 DVV14_RS09500 WP_006958122.1 2104568..2105173(+) (opaR) [Vibrio coralliilyticus strain RE22]
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
Nucleotide
Download Length: 606 bp
>NTDB_id=307049 DVV14_RS09500 WP_006958122.1 2104568..2105173(+) (opaR) [Vibrio coralliilyticus strain RE22]
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACAGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGTGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCACTGTTTGTGCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACAGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGTGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCACTGTTTGTGCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
85 |
99.502 |
0.846 |
| hapR | Vibrio cholerae C6706 |
76.382 |
99.005 |
0.756 |
| hapR | Vibrio cholerae strain A1552 |
76.382 |
99.005 |
0.756 |