Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | SDEG_RS08730 | Genome accession | NC_012891 |
| Coordinates | 1721319..1722353 (-) | Length | 344 a.a. |
| NCBI ID | WP_012767491.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1716319..1727353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDEG_RS08695 (SDEG_1790) | - | 1716944..1717246 (-) | 303 | WP_003052320.1 | YlxQ-related RNA-binding protein | - |
| SDEG_RS08700 (SDEG_1791) | - | 1717239..1717535 (-) | 297 | WP_003062190.1 | RNase P modulator RnpM | - |
| SDEG_RS08705 (SDEG_1792) | nusA | 1717551..1718708 (-) | 1158 | WP_041789227.1 | transcription termination factor NusA | - |
| SDEG_RS08710 (SDEG_1793) | rimP | 1718851..1719345 (-) | 495 | WP_044022604.1 | ribosome maturation factor RimP | - |
| SDEG_RS08720 (SDEG_1795) | trmB | 1719828..1720463 (-) | 636 | WP_003052470.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| SDEG_RS08725 (SDEG_1796) | - | 1720463..1721254 (-) | 792 | WP_003052472.1 | cell cycle regulator CcrZ | - |
| SDEG_RS08730 (SDEG_1797) | pptB | 1721319..1722353 (-) | 1035 | WP_012767491.1 | ABC transporter permease | Regulator |
| SDEG_RS08735 (SDEG_1798) | pptA | 1722356..1723081 (-) | 726 | WP_012767492.1 | ABC transporter ATP-binding protein | Regulator |
| SDEG_RS08740 (SDEG_1799) | - | 1723153..1723572 (+) | 420 | WP_012767493.1 | HIT family protein | - |
| SDEG_RS08745 (SDEG_1800) | - | 1723569..1723898 (+) | 330 | WP_003057072.1 | hypothetical protein | - |
| SDEG_RS08750 (SDEG_1801) | - | 1724056..1725324 (-) | 1269 | WP_041789135.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| SDEG_RS08755 (SDEG_1802) | - | 1725336..1725857 (-) | 522 | WP_003057063.1 | GNAT family N-acetyltransferase | - |
| SDEG_RS08760 (SDEG_1803) | tsaE | 1725850..1726293 (-) | 444 | WP_041789229.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 40250.52 Da Isoelectric Point: 10.2471
>NTDB_id=30700 SDEG_RS08730 WP_012767491.1 1721319..1722353(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
MKVLFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLFGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDHHFLLPKEEAVVAHIKQAERSALVIWGCLQTAILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRHFLKKDG
LDWEKAIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNAYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVVVMGVITLFYLPYKLKKIID
MKVLFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLFGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDHHFLLPKEEAVVAHIKQAERSALVIWGCLQTAILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRHFLKKDG
LDWEKAIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNAYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVVVMGVITLFYLPYKLKKIID
Nucleotide
Download Length: 1035 bp
>NTDB_id=30700 SDEG_RS08730 WP_012767491.1 1721319..1722353(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
ATGAAAGTATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGTTTGGTTTTTGCTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAATC
ATTGGCCTATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATCACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGCTGAACGCTCTGCCCTTGTAAT
TTGGGGCTGTTTACAGACAGCTATCCTCATCTTTTTATATCCGATCTTCAATCGCCTAGGCTTCTCCTTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACACTTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGCCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTATTATTATTGAGT
TCCCTAGCCTTACTGTTTATTTCTAACGCTTACCTATCAGTGGCTTTAGCCTTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACTAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTATTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCCTGCTCTGCCATTCTTTAGAAAAAGCC
CTTATTTTAGTAGTGGTCATGGGAGTCATTACGCTTTTCTACCTCCCTTATAAGTTGAAGAAGATAATTGACTAA
ATGAAAGTATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGTTTGGTTTTTGCTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAATC
ATTGGCCTATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATCACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGCTGAACGCTCTGCCCTTGTAAT
TTGGGGCTGTTTACAGACAGCTATCCTCATCTTTTTATATCCGATCTTCAATCGCCTAGGCTTCTCCTTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACACTTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGCCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTATTATTATTGAGT
TCCCTAGCCTTACTGTTTATTTCTAACGCTTACCTATCAGTGGCTTTAGCCTTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACTAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTATTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCCTGCTCTGCCATTCTTTAGAAAAAGCC
CTTATTTTAGTAGTGGTCATGGGAGTCATTACGCTTTTCTACCTCCCTTATAAGTTGAAGAAGATAATTGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus thermophilus LMD-9 |
46.802 |
100 |
0.468 |
| pptB | Streptococcus salivarius strain HSISS4 |
46.512 |
100 |
0.465 |