Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   KAN02_RS17745 Genome accession   NZ_CP036171
Coordinates   3695194..3695829 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter nosocomialis strain KAN02     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3690194..3700829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN02_RS17725 (KAN02_17725) - 3690271..3691086 (+) 816 WP_087605897.1 DsbC family protein -
  KAN02_RS17730 (KAN02_17730) - 3691331..3692632 (+) 1302 WP_002048970.1 homoserine dehydrogenase -
  KAN02_RS17735 (KAN02_17735) thrC 3692688..3693827 (+) 1140 WP_002048893.1 threonine synthase -
  KAN02_RS17740 (KAN02_17740) pbpG 3693936..3694982 (-) 1047 WP_004710943.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  KAN02_RS17745 (KAN02_17745) letA 3695194..3695829 (+) 636 WP_000633799.1 response regulator Regulator
  KAN02_RS17750 (KAN02_17750) pilS 3695840..3697408 (+) 1569 WP_213062638.1 PAS domain-containing sensor histidine kinase Regulator
  KAN02_RS17755 (KAN02_17755) - 3697433..3698854 (+) 1422 WP_087605898.1 sigma-54-dependent transcriptional regulator -
  KAN02_RS17760 (KAN02_17760) - 3698858..3700042 (-) 1185 WP_004883636.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=306701 KAN02_RS17745 WP_000633799.1 3695194..3695829(+) (letA) [Acinetobacter nosocomialis strain KAN02]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=306701 KAN02_RS17745 WP_000633799.1 3695194..3695829(+) (letA) [Acinetobacter nosocomialis strain KAN02]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCAGATGT
TGAGGTAATTGGACAAGCCGAATCTGGGGAAGAAGCTATTGCTATCGTTCGCCAGCAACATCCGCAAGTCGTACTACTTG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACTCGTCGTTTATTACAAACAGCTCCAGAAACGAAAGTCATTGCT
GTAAGTGGCCTTGCCGAAGAACCCTACCCATCTTTATTGCTAAAAGCTGGAGCAAAAGGCTATATCACCAAAGGAGCTCC
AATTGCCGAGATGGTTCGTGCAATTAATAAGGTCATGCAGGGTGGTAAATATTTTAGTGCCGATATTGCCGAGCAACTGG
CAAGCTCTTATTTATCTGATACTCAACAATCTCCTTTTGATTCGTTATCGGAGCGGGAAATGCAAGTTGCGATGATGGTC
GTTAACTGTATTAGCGCACAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTACCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTCACACATCTTGCGATTCGTTACGGTCTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55