Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DWG18_RS01460 Genome accession   NZ_CP031413
Coordinates   300256..300654 (+) Length   132 a.a.
NCBI ID   WP_115644740.1    Uniprot ID   -
Organism   Lysobacter sp. TY2-98     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 295256..305654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DWG18_RS01440 (DWG18_01440) - 295438..297486 (+) 2049 WP_115644736.1 ATP-dependent DNA helicase -
  DWG18_RS01445 (DWG18_01445) tsaB 297506..298210 (+) 705 WP_115644737.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  DWG18_RS01450 (DWG18_01450) - 298253..299131 (-) 879 WP_115644738.1 TonB family protein -
  DWG18_RS01455 (DWG18_01455) gshB 299136..300083 (-) 948 WP_115644739.1 glutathione synthase -
  DWG18_RS01460 (DWG18_01460) pilG 300256..300654 (+) 399 WP_115644740.1 twitching motility response regulator PilG Regulator
  DWG18_RS01465 (DWG18_01465) - 300674..301039 (+) 366 WP_115644742.1 response regulator -
  DWG18_RS01470 (DWG18_01470) - 301041..301589 (+) 549 WP_115644744.1 chemotaxis protein CheW -
  DWG18_RS01475 (DWG18_01475) - 301632..303641 (+) 2010 WP_240318623.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14648.85 Da        Isoelectric Point: 7.8239

>NTDB_id=306561 DWG18_RS01460 WP_115644740.1 300256..300654(+) (pilG) [Lysobacter sp. TY2-98]
MQDDARNGSLGGLKVMVIDDSKTIRRTAETLLKREGCDVVTASDGFEALAKIADQNPQIIFVDVMMPRLDGYQTCALIKN
NQSFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=306561 DWG18_RS01460 WP_115644740.1 300256..300654(+) (pilG) [Lysobacter sp. TY2-98]
ATGCAGGATGACGCCCGCAACGGCAGCCTGGGCGGCCTCAAGGTCATGGTCATCGACGACTCGAAGACCATTCGACGCAC
GGCCGAGACGCTGCTCAAGCGCGAGGGCTGTGACGTGGTGACCGCCTCGGACGGCTTTGAAGCGTTGGCGAAGATCGCCG
ACCAGAACCCGCAGATCATTTTCGTGGACGTGATGATGCCGCGCCTGGACGGTTACCAGACCTGCGCGCTCATCAAGAAC
AACCAGAGTTTCAAGTCGACGCCCGTGATCATGCTGTCCTCGAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCATCGT
CGGTTCGGAGCAGTACCTGACCAAACCGTTCACCCGCGAAGAACTGCTCGACGCGATCCGCAAGCACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697
  vicR Streptococcus mutans UA159

41.026

88.636

0.364

Multiple sequence alignment