Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   DV160_RS00375 Genome accession   NZ_CP031336
Coordinates   60336..61034 (-) Length   232 a.a.
NCBI ID   WP_002221583.1    Uniprot ID   A1KRV7
Organism   Neisseria meningitidis strain M21717     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 55336..66034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV160_RS00360 - 55559..56692 (-) 1134 WP_024464926.1 peptidylprolyl isomerase -
  DV160_RS00365 - 56797..59205 (-) 2409 WP_002247753.1 LPS-assembly protein LptD -
  DV160_RS00370 amgK 59275..60279 (+) 1005 WP_002221582.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  DV160_RS00375 dsbA1 60336..61034 (-) 699 WP_002221583.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV160_RS14075 - 61328..61435 (-) 108 Protein_59 IS5/IS1182 family transposase -
  DV160_RS00385 murJ 61493..63031 (+) 1539 WP_002221584.1 murein biosynthesis integral membrane protein MurJ -
  DV160_RS00390 - 63164..64120 (+) 957 WP_002221585.1 YheT family hydrolase -
  DV160_RS00395 trpC 64171..64953 (+) 783 WP_002221587.1 indole-3-glycerol phosphate synthase TrpC -

Sequence


Protein


Download         Length: 232 a.a.        Molecular weight: 25236.83 Da        Isoelectric Point: 5.3490

>NTDB_id=306050 DV160_RS00375 WP_002221583.1 60336..61034(-) (dsbA1) [Neisseria meningitidis strain M21717]
MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=306050 DV160_RS00375 WP_002221583.1 60336..61034(-) (dsbA1) [Neisseria meningitidis strain M21717]
ATGAAATCCAAACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCACTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACTGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGACGCTCGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCTTACGAATCTCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTTCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains


Predicted by InterproScan.

(63-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A1KRV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

99.138

100

0.991

  dsbA2 Neisseria meningitidis MC58

76.19

81.466

0.621


Multiple sequence alignment