Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   DV166_RS06595 Genome accession   NZ_CP031334
Coordinates   1111876..1112520 (+) Length   214 a.a.
NCBI ID   WP_002220358.1    Uniprot ID   A0A0U1RK99
Organism   Neisseria meningitidis strain M22293     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1106876..1117520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV166_RS06570 putP 1107083..1108609 (-) 1527 WP_002220352.1 sodium/proline symporter PutP -
  DV166_RS06580 - 1109092..1109412 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  DV166_RS06585 comM 1109426..1110922 (+) 1497 WP_002220355.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  DV166_RS06590 ftsN 1111028..1111873 (+) 846 WP_002220356.1 cell division protein FtsN -
  DV166_RS06595 dsbA1 1111876..1112520 (+) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV166_RS06600 - 1112553..1113374 (+) 822 WP_002220359.1 undecaprenyl-diphosphate phosphatase -
  DV166_RS06615 - 1113947..1115137 (-) 1191 WP_050584817.1 class I SAM-dependent methyltransferase -
  DV166_RS06620 mraZ 1115443..1115898 (+) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  DV166_RS06625 rsmH 1115895..1116881 (+) 987 WP_061837686.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  DV166_RS06630 ftsL 1116878..1117141 (+) 264 WP_002220363.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23970.99 Da        Isoelectric Point: 10.0160

>NTDB_id=305980 DV166_RS06595 WP_002220358.1 1111876..1112520(+) (dsbA1) [Neisseria meningitidis strain M22293]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVKLSGLKYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=305980 DV166_RS06595 WP_002220358.1 1111876..1112520(+) (dsbA1) [Neisseria meningitidis strain M22293]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAAAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTAAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGAAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTACGACTCTCCTGCGGCAGCGGCTGCTGCATCAAAAATGCAGCAA
TTGACGGAACAGTACCGCATCGACAGTACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGTGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RK99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.851

87.85

0.491
  dsbA2 Neisseria meningitidis MC58

50.538

86.916

0.439

Multiple sequence alignment