Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DV143_RS07140 Genome accession   NZ_CP031333
Coordinates   1198441..1199136 (-) Length   231 a.a.
NCBI ID   WP_002226967.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18727     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1193441..1204136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV143_RS07130 - 1195712..1196518 (-) 807 WP_002242238.1 inner membrane protein YpjD -
  DV143_RS07135 ffh 1196738..1198108 (+) 1371 WP_014581321.1 signal recognition particle protein -
  DV143_RS07140 dsbA2 1198441..1199136 (-) 696 WP_002226967.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV143_RS07145 - 1199251..1201362 (-) 2112 Protein_1158 TonB-dependent receptor -
  DV143_RS07150 - 1201548..1202153 (-) 606 WP_002215700.1 nitroreductase family protein -
  DV143_RS07155 - 1202202..1202600 (-) 399 WP_002216361.1 DoxX family protein -
  DV143_RS07160 - 1202708..1203619 (+) 912 WP_002215698.1 LysR family transcriptional regulator -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25358.84 Da        Isoelectric Point: 5.3576

>NTDB_id=305929 DV143_RS07140 WP_002226967.1 1198441..1199136(-) (dsbA2) [Neisseria meningitidis strain M18727]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFDAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=305929 DV143_RS07140 WP_002226967.1 1198441..1199136(-) (dsbA2) [Neisseria meningitidis strain M18727]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCCACGCCTATCCCGCAACAGCAGGCCGGCAAAGTCGAAGTCTTGGAATTTTTCGGCTACTTCTGTCCGCATTGCGCA
CATTTGGAACCGGTTTTGAGCGAACACACCAAAACGTTTAAAGACGATACCTACCTGCGTCGCGAGCATGTGATTTGGGG
TGACGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGATGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(64-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.537

100

0.965

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment